RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 NOL9Q5SY16 702 aaKnown RBP28.62■■■□□ 2.17
COL13A1-214ENST00000522165 REPS2Q8NFH8 660 aa28.62■■■□□ 2.17
COL13A1-214ENST00000522165 DHX15O43143 795 aaKnown RBP28.61■■■□□ 2.17
COL13A1-214ENST00000522165 RBM10P98175 930 aaKnown RBP28.61■■■□□ 2.17
COL13A1-214ENST00000522165 MEA1Q16626 185 aa28.61■■■□□ 2.17
COL13A1-214ENST00000522165 SUPT20HL1Q3ZLR7 823 aa28.61■■■□□ 2.17
COL13A1-214ENST00000522165 WDR59Q6PJI9 974 aa28.61■■■□□ 2.17
COL13A1-214ENST00000522165 RNF207Q6ZRF8 634 aa28.61■■■□□ 2.17
COL13A1-214ENST00000522165 AGO4Q9HCK5 861 aaKnown RBP28.61■■■□□ 2.17
COL13A1-214ENST00000522165 GAP43P17677 238 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 MARSP56192 900 aaKnown RBP28.6■■■□□ 2.17
COL13A1-214ENST00000522165 GNG11P61952 73 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 PGM5Q15124 567 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 CCDC40Q4G0X9 1142 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 ACRBPQ8NEB7 543 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 NEK9Q8TD19 979 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 ADAMTS5Q9UNA0 930 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 SBF1O95248 1867 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 EIF2AK2P19525 551 aaKnown RBP28.6■■■□□ 2.17
COL13A1-214ENST00000522165 DSG3P32926 999 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 HOXD13P35453 343 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 KNOP1Q1ED39 458 aaKnown RBP28.6■■■□□ 2.17
COL13A1-214ENST00000522165 LXNQ9BS40 222 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 SPON1Q9HCB6 807 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 OLFML3Q9NRN5 406 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 PKD2L1Q9P0L9 805 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 TRAF3IP3Q9Y228 551 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 RIPK3Q9Y572 518 aa28.6■■■□□ 2.17
COL13A1-214ENST00000522165 DDX39AO00148 427 aaKnown RBP28.59■■■□□ 2.17
COL13A1-214ENST00000522165 MYBP10242 640 aa28.59■■■□□ 2.17
COL13A1-214ENST00000522165 BMT2Q1RMZ1 405 aa28.59■■■□□ 2.17
COL13A1-214ENST00000522165 WDR24Q96S15 920 aa28.59■■■□□ 2.17
COL13A1-214ENST00000522165 RNF146Q9NTX7 359 aa28.59■■■□□ 2.17
COL13A1-214ENST00000522165 UTRNP46939 3433 aa28.59■■■□□ 2.17
COL13A1-214ENST00000522165 A0A0U1RQJ8 604 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 OAZ1P54368 228 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 ITGB3BPQ13352 177 aaPredicted RBP28.58■■■□□ 2.17
COL13A1-214ENST00000522165 NSMFQ6X4W1 530 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 MIER3Q7Z3K6 550 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 ZNF710Q8N1W2 664 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 ATRIPQ8WXE1 791 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 RMDN3Q96TC7 470 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 BCAS3Q9H6U6 928 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 POLD4Q9HCU8 107 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 LZTFL1Q9NQ48 299 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 PXMP2Q9NR77 195 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 ZNF215Q9UL58 517 aaPredicted RBP28.58■■■□□ 2.17
COL13A1-214ENST00000522165 ERCC3P19447 782 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 ADAM9Q13443 819 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 MTMR1Q13613 665 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.58■■■□□ 2.17
COL13A1-214ENST00000522165 PDCD2LQ9BRP1 358 aa28.58■■■□□ 2.17
COL13A1-214ENST00000522165 EPN1Q9Y6I3 576 aaPredicted RBP28.58■■■□□ 2.17
COL13A1-214ENST00000522165 COL11A1P12107 1806 aaPredicted RBP28.57■■■□□ 2.16
COL13A1-214ENST00000522165 PRPF6O94906 941 aaKnown RBP28.57■■■□□ 2.16
COL13A1-214ENST00000522165 COG2Q14746 738 aa28.57■■■□□ 2.16
COL13A1-214ENST00000522165 BANK1Q8NDB2 785 aa28.57■■■□□ 2.16
COL13A1-214ENST00000522165 ZNF397Q8NF99 534 aaPredicted RBP28.57■■■□□ 2.16
COL13A1-214ENST00000522165 KCND2Q9NZV8 630 aa28.57■■■□□ 2.16
COL13A1-214ENST00000522165 AFG3L2Q9Y4W6 797 aa28.57■■■□□ 2.16
COL13A1-214ENST00000522165 POLR2AP24928 1970 aaKnown RBP28.57■■■□□ 2.16
COL13A1-214ENST00000522165 FAM13AO94988 1023 aa28.57■■■□□ 2.16
COL13A1-214ENST00000522165 NDUFA10O95299 355 aa28.57■■■□□ 2.16
COL13A1-214ENST00000522165 SLU7O95391 586 aaKnown RBP28.57■■■□□ 2.16
COL13A1-214ENST00000522165 TRIM59Q8IWR1 403 aa28.57■■■□□ 2.16
COL13A1-214ENST00000522165 PDXKO00764 312 aa28.56■■■□□ 2.16
COL13A1-214ENST00000522165 CETN3O15182 167 aa28.56■■■□□ 2.16
COL13A1-214ENST00000522165 DDNO94850 711 aaPredicted RBP28.56■■■□□ 2.16
COL13A1-214ENST00000522165 CASQ1P31415 396 aa28.56■■■□□ 2.16
COL13A1-214ENST00000522165 SNRNP48Q6IEG0 339 aaKnown RBP28.56■■■□□ 2.16
COL13A1-214ENST00000522165 CATSPERGQ6ZRH7 1159 aa28.56■■■□□ 2.16
COL13A1-214ENST00000522165 ZNHIT6Q9NWK9 470 aaKnown RBP28.56■■■□□ 2.16
COL13A1-214ENST00000522165 TMOD4Q9NZQ9 345 aa28.56■■■□□ 2.16
COL13A1-214ENST00000522165 ZNF214Q9UL59 606 aaPredicted RBP28.56■■■□□ 2.16
COL13A1-214ENST00000522165 SFI1A8K8P3 1242 aa28.55■■■□□ 2.16
COL13A1-214ENST00000522165 USP2O75604 605 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-214ENST00000522165 NR2F2P24468 414 aa28.55■■■□□ 2.16
COL13A1-214ENST00000522165 BAATQ14032 418 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-214ENST00000522165 PURBQ96QR8 312 aaKnown RBP28.55■■■□□ 2.16
COL13A1-214ENST00000522165 FHDC1Q9C0D6 1143 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-214ENST00000522165 TBC1D22BQ9NU19 505 aa28.55■■■□□ 2.16
COL13A1-214ENST00000522165 EPHB6O15197 1021 aa28.55■■■□□ 2.16
COL13A1-214ENST00000522165 GCNT3O95395 438 aa28.55■■■□□ 2.16
COL13A1-214ENST00000522165 P4HBP07237 508 aaKnown RBP28.55■■■□□ 2.16
COL13A1-214ENST00000522165 MYCLP12524 364 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-214ENST00000522165 NCBP1Q09161 790 aaKnown RBP28.55■■■□□ 2.16
COL13A1-214ENST00000522165 ARHGEF16Q5VV41 709 aa28.55■■■□□ 2.16
COL13A1-214ENST00000522165 ERO1AQ96HE7 468 aa28.55■■■□□ 2.16
COL13A1-214ENST00000522165 IRX2Q9BZI1 471 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-214ENST00000522165 MMRN2Q9H8L6 949 aa28.55■■■□□ 2.16
COL13A1-214ENST00000522165 PARVGQ9HBI0 331 aa28.55■■■□□ 2.16
COL13A1-214ENST00000522165 FAM207AQ9NSI2 230 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-214ENST00000522165 CALUO43852 315 aaPredicted RBP28.54■■■□□ 2.16
COL13A1-214ENST00000522165 ZNF131P52739 623 aa28.54■■■□□ 2.16
COL13A1-214ENST00000522165 PRKG1Q13976 671 aa28.54■■■□□ 2.16
COL13A1-214ENST00000522165 MYCT1Q8N699 235 aa28.54■■■□□ 2.16
COL13A1-214ENST00000522165 TYW1Q9NV66 732 aaKnown RBP28.54■■■□□ 2.16
COL13A1-214ENST00000522165 REXO2Q9Y3B8 237 aaKnown RBP28.54■■■□□ 2.16
COL13A1-214ENST00000522165 LOXHD1Q8IVV2 1947 aa28.54■■■□□ 2.16
COL13A1-214ENST00000522165 EIF3DO15371 548 aaKnown RBP eCLIP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms