RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 ANKRD62A6NC57 917 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 RNF40O75150 1001 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 LRRN2O75325 713 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 MMP14P50281 582 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 CDKAL1Q5VV42 579 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 OTUD6AQ7L8S5 288 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 VEGFAP15692 232 aaPredicted RBP12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 ALKBH5Q6P6C2 394 aaKnown RBP12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 RUFY4Q6ZNE9 571 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 PCIF1Q9H4Z3 704 aa12.3□□□□□ -0.44
PCDHGB4-201ENST00000519479 ESYT2A0FGR8 921 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 SORBS3O60504 671 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 N4BP1O75113 896 aaKnown RBP12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 TNNI1P19237 187 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 EVX2Q03828 476 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 CEP85LQ5SZL2 805 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 CCDC105Q8IYK2 499 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 CCDC77Q9BR77 488 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 STMN4Q9H169 189 aaPredicted RBP12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 DPH5Q9H2P9 285 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 DLATP10515 647 aaKnown RBP12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 LMNB1P20700 586 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 KLK7P49862 253 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 NAALADL2Q58DX5 795 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 ST7Q9NRC1 585 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 KBTBD4Q9NVX7 518 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
PCDHGB4-201ENST00000519479 NPHP3-ACAD11A0A0J9YXS1 232 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 NR3C1P04150 777 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 DPEP1P16444 411 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 CTNNA1P35221 906 aaKnown RBP12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 EPHB4P54760 987 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 KNOP1Q1ED39 458 aaKnown RBP12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 EAPPQ56P03 285 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 RNF14Q9UBS8 474 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 MKRN1Q9UHC7 482 aaKnown RBP12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 SLC37A4O43826 429 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 HOXA10P31260 410 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 ATP1A2P50993 1020 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 KRT71Q3SY84 523 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 HHIPL2Q6UWX4 724 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 COL16A1Q07092 1604 aaPredicted RBP12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 A6NNZ2 444 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 ERVK-24P63145 666 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 GNGT1P63211 74 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 TUBB8Q3ZCM7 444 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 DPH6Q7L8W6 267 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 RAB17Q9H0T7 212 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 VPS33BQ9H267 617 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 LRRC4BQ9NT99 713 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 CEP83Q9Y592 693 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 AFDNP55196 1824 aaKnown RBP12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 A0A1W2PRG0 241 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 PALMO75781 387 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 KCTD16Q68DU8 428 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 NFRKBQ6P4R8 1299 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 FAM160B2Q86V87 743 aa12.28□□□□□ -0.44
PCDHGB4-201ENST00000519479 GOLGA8KD6RF30 607 aa12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 KIF4AO95239 1232 aa12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 NDUFB10O96000 172 aa12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 VSNL1P62760 191 aa12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 DMP1Q13316 513 aaPredicted RBP12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 PTF1AQ7RTS3 328 aa12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 EXOC4Q96A65 974 aa12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 ASIC3Q9UHC3 531 aa12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 ADAM21Q9UKJ8 722 aa12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 TFR2Q9UP52 801 aa12.27□□□□□ -0.44
PCDHGB4-201ENST00000519479 NCK2O43639 380 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 MTMR3Q13615 1198 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 RGPD2P0DJD1 1756 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 ACTN2P35609 894 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 CCDC121Q6ZUS5 278 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 DYDC2Q96IM9 177 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 PAIP2Q9BPZ3 127 aaKnown RBP12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 ZNF341Q9BYN7 854 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 ZNF277Q9NRM2 450 aaPredicted RBP12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 CYTH3O43739 400 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 EIF2AK2P19525 551 aaKnown RBP12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 LIN9Q5TKA1 542 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 PDXDC1Q6P996 788 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 GSPT2Q8IYD1 628 aaKnown RBP12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 POMGNT1Q8WZA1 660 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 ACCSQ96QU6 501 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 RGL1Q9NZL6 768 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 NYAP2Q9P242 653 aa12.27□□□□□ -0.45
PCDHGB4-201ENST00000519479 PGRMC1O00264 195 aaKnown RBP12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 ASNSP08243 561 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 CLUL1Q15846 466 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 GNPTABQ3T906 1256 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 C10orf76Q5T2E6 689 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 TTI2Q6NXR4 508 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 OSBPL9Q96SU4 736 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 MMS19Q96T76 1030 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 CAPS2Q9BXY5 557 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 RPS12P25398 132 aaKnown RBP12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 USP14P54578 494 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms