RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 LOXHD1Q8IVV2 1947 aa11.9□□□□□ -0.5
CPEB4-203ENST00000517880 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.51
CPEB4-203ENST00000517880 UQCRHLA0A096LP55 91 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 TRAF5O00463 557 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 PDXKO00764 312 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 CETN3O15182 167 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 CALUO43852 315 aaPredicted RBP11.89□□□□□ -0.51
CPEB4-203ENST00000517880 TBCAO75347 108 aaKnown RBP11.89□□□□□ -0.51
CPEB4-203ENST00000517880 LYPLA2O95372 231 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 UQCRHP07919 91 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 CCDC175P0C221 793 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 ITGB5P18084 799 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 CCND2P30279 289 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 SFNP31947 248 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 KRT9P35527 623 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 IREB2P48200 963 aaKnown RBP11.89□□□□□ -0.51
CPEB4-203ENST00000517880 HMGCS2P54868 508 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 ETF1P62495 437 aaKnown RBP11.89□□□□□ -0.51
CPEB4-203ENST00000517880 UBXN2AP68543 259 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 PGM5Q15124 567 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 KNOP1Q1ED39 458 aaKnown RBP11.89□□□□□ -0.51
CPEB4-203ENST00000517880 BMT2Q1RMZ1 405 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 ARHGEF16Q5VV41 709 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 RINT1Q6NUQ1 792 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 C1orf186Q6ZWK4 172 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 EPM2AIP1Q7L775 607 aaPredicted RBP11.89□□□□□ -0.51
CPEB4-203ENST00000517880 MIER3Q7Z3K6 550 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
CPEB4-203ENST00000517880 ATG4CQ96DT6 458 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 TAAR1Q96RJ0 339 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 UIMC1Q96RL1 719 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 RMDN3Q96TC7 470 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 REEP2Q9BRK0 252 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 TIPINQ9BVW5 301 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 KCTD10Q9H3F6 313 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 NDST4Q9H3R1 872 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 UNC45AQ9H3U1 944 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 ZSWIM4Q9H7M6 989 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 PXMP2Q9NR77 195 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 RNF146Q9NTX7 359 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 ABHD10Q9NUJ1 306 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 RGL1Q9NZL6 768 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 RNF181Q9P0P0 153 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 TCEAL9Q9UHQ7 104 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 FAM184BQ9ULE4 1060 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 TRAF3IP3Q9Y228 551 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 PARP14Q460N5 1801 aa11.89□□□□□ -0.51
CPEB4-203ENST00000517880 B4DLN1 442 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 EIF3DO15371 548 aaKnown RBP eCLIP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 DHX15O43143 795 aaKnown RBP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 DDNO94850 711 aaPredicted RBP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 RPL13P26373 211 aaKnown RBP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 FXR1P51114 621 aaKnown RBP eCLIP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 ZBED6P86452 979 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 CYP4A11Q02928 519 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 GOLGA8FQ08AF8 430 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 GOLGA8DPQ0D2H9 430 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 MTMR1Q13613 665 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 CTTNQ14247 550 aaKnown RBP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 LRRC41Q15345 812 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 PTPN21Q16825 1174 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 MIIPQ5JXC2 388 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 PRAMEF18Q5VWM3 479 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 LRRC55Q6ZSA7 311 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 USP50Q70EL3 339 aaPredicted RBP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 NLRX1Q86UT6 975 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 CHST13Q8NET6 341 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 NSUN6Q8TEA1 469 aaKnown RBP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 SCFD1Q8WVM8 642 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 GPRASP2Q96D09 838 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 CDHR1Q96JP9 859 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 DNAJC7Q99615 494 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 PDCD2LQ9BRP1 358 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 TEX13BQ9BXU2 312 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 ZHX3Q9H4I2 956 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 ZNHIT6Q9NWK9 470 aaKnown RBP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 DBR1Q9UK59 544 aaKnown RBP11.88□□□□□ -0.51
CPEB4-203ENST00000517880 CSADQ9Y600 493 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 UBE4BO95155 1302 aa11.88□□□□□ -0.51
CPEB4-203ENST00000517880 NPHP3-ACAD11A0A0J9YXS1 232 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 CHMP2AO43633 222 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
CPEB4-203ENST00000517880 FAM13AO94988 1023 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 MAPTP10636 758 aaKnown RBP11.87□□□□□ -0.51
CPEB4-203ENST00000517880 NF2P35240 595 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 JAK3P52333 1124 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 CDK17Q00537 523 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 KRT76Q01546 638 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 BAATQ14032 418 aaPredicted RBP11.87□□□□□ -0.51
CPEB4-203ENST00000517880 SYCP1Q15431 976 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 NFIL3Q16649 462 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 SNRNP48Q6IEG0 339 aaKnown RBP11.87□□□□□ -0.51
CPEB4-203ENST00000517880 NSMFQ6X4W1 530 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 VSIG10LQ86VR7 867 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 SENP7Q9BQF6 1050 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 SYT17Q9BSW7 474 aa11.87□□□□□ -0.51
CPEB4-203ENST00000517880 ACAD9Q9H845 621 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms