RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 CBX7O95931 251 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 GSNP06396 782 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 SRFP11831 508 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 ITIH2P19823 946 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 POU3F2P20265 443 aaPredicted RBP8.77□□□□□ -1.01
RFC1-213ENST00000512275 CNGA1P29973 690 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 CDKN1CP49918 316 aaPredicted RBP8.77□□□□□ -1.01
RFC1-213ENST00000512275 ZKSCAN2Q63HK3 967 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 MAMDC2Q7Z304 686 aaPredicted RBP8.77□□□□□ -1.01
RFC1-213ENST00000512275 FGD2Q7Z6J4 655 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 NBPF11Q86T75 865 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 AFAP1L2Q8N4X5 818 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 KREMEN2Q8NCW0 462 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 ENOX1Q8TC92 643 aaKnown RBP8.77□□□□□ -1.01
RFC1-213ENST00000512275 DDX1Q92499 740 aaKnown RBP8.77□□□□□ -1.01
RFC1-213ENST00000512275 PTPRN2Q92932 1015 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 SCLYQ96I15 445 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 FMNL2Q96PY5 1086 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 C7orf69Q9H7B7 122 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 RGS17Q9UGC6 210 aaPredicted RBP8.77□□□□□ -1.01
RFC1-213ENST00000512275 GTF2IRD1Q9UHL9 959 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 ASAP1Q9ULH1 1129 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 NOB1Q9ULX3 412 aaKnown RBP8.77□□□□□ -1.01
RFC1-213ENST00000512275 KIF16BQ96L93 1317 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 CICQ96RK0 1608 aaPredicted RBP8.76□□□□□ -1.01
RFC1-213ENST00000512275 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 AFDNP55196 1824 aaKnown RBP8.76□□□□□ -1.01
RFC1-213ENST00000512275 TAF1LQ8IZX4 1826 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 ANXA1P04083 346 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 HOXB7P09629 217 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 TNK2Q07912 1038 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 PRSS53Q2L4Q9 553 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 LCE3BQ5TA77 95 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 CCDC30Q5VVM6 783 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 G2E3Q7L622 706 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 DAGLBQ8NCG7 672 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 PANK1Q8TE04 598 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 COPS5Q92905 334 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 STK31Q9BXU1 1019 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 GPR62Q9BZJ7 368 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 ATG3Q9NT62 314 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 CHPF2Q9P2E5 772 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 ST14Q9Y5Y6 855 aa8.76□□□□□ -1.01
RFC1-213ENST00000512275 SOS1Q07889 1333 aaPredicted RBP8.76□□□□□ -1.01
RFC1-213ENST00000512275 NUP188Q5SRE5 1749 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 TNS1Q9HBL0 1735 aaKnown RBP8.75□□□□□ -1.01
RFC1-213ENST00000512275 HMX2A2RU54 273 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 HYAL3O43820 417 aaPredicted RBP8.75□□□□□ -1.01
RFC1-213ENST00000512275 PDGFRBP09619 1106 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 SNRPA1P09661 255 aaKnown RBP8.75□□□□□ -1.01
RFC1-213ENST00000512275 KCNJ6P48051 423 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 TESK1Q15569 626 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 STYK1Q6J9G0 422 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 CRTC3Q6UUV7 619 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 PTF1AQ7RTS3 328 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 KRT27Q7Z3Y8 459 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 DDX42Q86XP3 938 aaKnown RBP eCLIP8.75□□□□□ -1.01
RFC1-213ENST00000512275 SHISA5Q8N114 240 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 PPM1KQ8N3J5 372 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 MFSD4AQ8N468 514 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 EXOC6Q8TAG9 804 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 NPLOC4Q8TAT6 608 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 TBC1D32Q96NH3 1257 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 TNPO3Q9Y5L0 923 aaKnown RBP8.75□□□□□ -1.01
RFC1-213ENST00000512275 ZNF831Q5JPB2 1677 aa8.75□□□□□ -1.01
RFC1-213ENST00000512275 AURKAO14965 403 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 ASLP04424 464 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 TRIM27P14373 513 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 ECI1P42126 302 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 PIP4K2AP48426 406 aaPredicted RBP8.74□□□□□ -1.01
RFC1-213ENST00000512275 POU4F1Q01851 419 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 SCRN1Q12765 414 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 PROSER3Q2NL68 480 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 DPY19L1Q2PZI1 675 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 ATF7IPQ6VMQ6 1270 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 PRR23CQ6ZRP0 262 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 FTSJ3Q8IY81 847 aaKnown RBP8.74□□□□□ -1.01
RFC1-213ENST00000512275 ZNF655Q8N720 491 aaPredicted RBP8.74□□□□□ -1.01
RFC1-213ENST00000512275 UBR7Q8N806 425 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 ASCC2Q9H1I8 757 aaPredicted RBP8.74□□□□□ -1.01
RFC1-213ENST00000512275 DUSP15Q9H1R2 295 aaPredicted RBP8.74□□□□□ -1.01
RFC1-213ENST00000512275 USP16Q9Y5T5 823 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 RREB1Q92766 1687 aa8.74□□□□□ -1.01
RFC1-213ENST00000512275 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 MYH14Q7Z406 1995 aaKnown RBP8.73□□□□□ -1.01
RFC1-213ENST00000512275 STXBP3O00186 592 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 MEIS1O00470 390 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 IPO8O15397 1037 aaKnown RBP8.73□□□□□ -1.01
RFC1-213ENST00000512275 BMP8BP34820 402 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 NFKB2Q00653 900 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 ZNF460Q14592 562 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 CYP27C1Q4G0S4 372 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 ACBD5Q5T8D3 534 aaPredicted RBP8.73□□□□□ -1.01
RFC1-213ENST00000512275 CNNM4Q6P4Q7 775 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 ZNF765Q7L2R6 523 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 DNAJC10Q8IXB1 793 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 FRS2Q8WU20 508 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 DCAF4Q8WV16 495 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 RAXQ9Y2V3 346 aa8.73□□□□□ -1.01
RFC1-213ENST00000512275 NPFFR2Q9Y5X5 522 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms