RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 CCDC60Q8IWA6 550 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-224ENST00000488927 NEK9Q8TD19 979 aa17.96■□□□□ 0.47
HDAC7-224ENST00000488927 PCYT2Q99447 389 aa17.96■□□□□ 0.47
HDAC7-224ENST00000488927 MAFBQ9Y5Q3 323 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-224ENST00000488927 STK24Q9Y6E0 443 aa17.96■□□□□ 0.47
HDAC7-224ENST00000488927 GRIN2DO15399 1336 aa17.96■□□□□ 0.46
HDAC7-224ENST00000488927 DCDC2CA8MYV0 355 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 GNAT1P11488 350 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 RTP1P59025 263 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 CHMP4BP1P59074 171 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 PKP1Q13835 747 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 PDIA5Q14554 519 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 SF3A1Q15459 793 aaKnown RBP17.95■□□□□ 0.46
HDAC7-224ENST00000488927 FAM47CQ5HY64 1035 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 NCAPH2Q6IBW4 605 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 PDXDC2PQ6P474 469 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 DTHD1Q6ZMT9 781 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 ERMNQ8TAM6 284 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 FAM167AQ96KS9 214 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 GABBR1Q9UBS5 961 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 RBM19Q9Y4C8 960 aaKnown RBP17.95■□□□□ 0.46
HDAC7-224ENST00000488927 IGSF9BQ9UPX0 1349 aa17.95■□□□□ 0.46
HDAC7-224ENST00000488927 SCN10AQ9Y5Y9 1956 aa17.94■□□□□ 0.46
HDAC7-224ENST00000488927 P4HBP07237 508 aaKnown RBP17.94■□□□□ 0.46
HDAC7-224ENST00000488927 TECP42680 631 aa17.94■□□□□ 0.46
HDAC7-224ENST00000488927 TRIM60Q495X7 471 aa17.94■□□□□ 0.46
HDAC7-224ENST00000488927 DPF3Q92784 378 aa17.94■□□□□ 0.46
HDAC7-224ENST00000488927 TSHZ2Q9NRE2 1034 aa17.94■□□□□ 0.46
HDAC7-224ENST00000488927 GTF2IRD1Q9UHL9 959 aa17.94■□□□□ 0.46
HDAC7-224ENST00000488927 ATP11BQ9Y2G3 1177 aa17.94■□□□□ 0.46
HDAC7-224ENST00000488927 MORC2Q9Y6X9 1032 aaPredicted RBP17.94■□□□□ 0.46
HDAC7-224ENST00000488927 DOCK5Q9H7D0 1870 aa17.94■□□□□ 0.46
HDAC7-224ENST00000488927 NRCAMQ92823 1304 aa17.94■□□□□ 0.46
HDAC7-224ENST00000488927 POTEB3A0JP26 581 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 EML1O00423 815 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 HBP1O60381 514 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 EVI5O60447 810 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 PQBP1O60828 265 aaKnown RBP17.93■□□□□ 0.46
HDAC7-224ENST00000488927 SMIM10L2AP0DMW4 78 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 SMIM10L2BP0DMW5 78 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 MARK3P27448 753 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 QARSP47897 775 aaKnown RBP17.93■□□□□ 0.46
HDAC7-224ENST00000488927 PSMC5P62195 406 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 FOXD4L5Q5VV16 416 aaPredicted RBP17.93■□□□□ 0.46
HDAC7-224ENST00000488927 HAUS3Q68CZ6 603 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 POTEBQ6S5H4 581 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 FAM126BQ8IXS8 530 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 CKAP2LQ8IYA6 745 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 ATP8B4Q8TF62 1192 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 FOXD4L4Q8WXT5 416 aaPredicted RBP17.93■□□□□ 0.46
HDAC7-224ENST00000488927 BBXQ8WY36 941 aaPredicted RBP17.93■□□□□ 0.46
HDAC7-224ENST00000488927 RNPEPQ9H4A4 650 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 NRBP2Q9NSY0 501 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 HDAC6Q9UBN7 1215 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 CFAP45Q9UL16 551 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
HDAC7-224ENST00000488927 TRPC6Q9Y210 931 aa17.93■□□□□ 0.46
HDAC7-224ENST00000488927 C17orf102A2RUQ5 167 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 RRN3P2A6NIE6 340 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 DDIT3P35638 169 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 NASPP49321 788 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-224ENST00000488927 MLLT1Q03111 559 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-224ENST00000488927 TLE2Q04725 743 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 PPFIA1Q13136 1202 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 PLCB4Q15147 1175 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 FAM173BQ6P4H8 233 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 IGSF22Q8N9C0 903 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 ZSWIM4Q9H7M6 989 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 LRWD1Q9UFC0 647 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 NOD1Q9Y239 953 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 NR2E3Q9Y5X4 410 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 CLIC4Q9Y696 253 aa17.92■□□□□ 0.46
HDAC7-224ENST00000488927 POTEMA6NI47 508 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 CD4P01730 458 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 CLTBP09497 229 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 HOXC8P31273 242 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 XKR3Q5GH77 459 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 AK8Q96MA6 479 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 USP28Q96RU2 1077 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 HSD17B14Q9BPX1 270 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 EIF2AK1Q9BQI3 630 aaKnown RBP17.91■□□□□ 0.46
HDAC7-224ENST00000488927 PRKAG2Q9UGJ0 569 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 ZDHHC9Q9Y397 364 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 COL1A2P08123 1366 aa17.91■□□□□ 0.46
HDAC7-224ENST00000488927 MKI67P46013 3256 aaKnown RBP17.9■□□□□ 0.46
HDAC7-224ENST00000488927 B4GALT4O60513 344 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 YEATS4O95619 227 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 OATP04181 439 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 MUTP22033 750 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 PRKCEQ02156 737 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 SLC39A14Q15043 492 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 PTPAQ15257 358 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 GRIK4Q16099 956 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 PTGISQ16647 500 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 ZNF484Q5JVG2 852 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 C4orf19Q8IY42 314 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 BANK1Q8NDB2 785 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 LXNQ9BS40 222 aa17.9■□□□□ 0.46
HDAC7-224ENST00000488927 POLR3CQ9BUI4 534 aaPredicted RBP17.9■□□□□ 0.46
HDAC7-224ENST00000488927 TUFT1Q9NNX1 390 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms