RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 BEND6Q5SZJ8 279 aaPredicted RBP20.32■□□□□ 0.84
COL16A1-215ENST00000488897 HDXQ7Z353 690 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 MB21D1Q8N884 522 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 CCDC148Q8NFR7 591 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 CLEC4DQ8WXI8 215 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 THAP9Q9H5L6 903 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 ZFYVE28Q9HCC9 887 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 RNF146Q9NTX7 359 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 MAPK8IP1Q9UQF2 711 aa20.32■□□□□ 0.84
COL16A1-215ENST00000488897 SMCO2A6NFE2 343 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 LAD1O00515 517 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 CA12O43570 354 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 TSR1Q2NL82 804 aaKnown RBP20.31■□□□□ 0.84
COL16A1-215ENST00000488897 C17orf99Q6UX52 265 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 IRF2BP1Q8IU81 584 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 DAGLBQ8NCG7 672 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 GPRC5AQ8NFJ5 357 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 RASSF8Q8NHQ8 419 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 CCSER1Q9C0I3 900 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 GBP3Q9H0R5 595 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 BARHL2Q9NY43 387 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 LGALS16A8MUM7 142 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 M0R2N6 131 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 NDUFA10O95299 355 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 UBA7P41226 1012 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 NOC3LQ8WTT2 800 aaKnown RBP20.31■□□□□ 0.84
COL16A1-215ENST00000488897 TEX13BQ9BXU2 312 aa20.31■□□□□ 0.84
COL16A1-215ENST00000488897 ZCCHC17Q9NP64 241 aaKnown RBP20.31■□□□□ 0.84
COL16A1-215ENST00000488897 LUC7L2Q9Y383 392 aaKnown RBP20.31■□□□□ 0.84
COL16A1-215ENST00000488897 PSMA7O14818 248 aa20.3■□□□□ 0.84
COL16A1-215ENST00000488897 NAALADL2Q58DX5 795 aa20.3■□□□□ 0.84
COL16A1-215ENST00000488897 SLC30A10Q6XR72 485 aa20.3■□□□□ 0.84
COL16A1-215ENST00000488897 COL20A1Q9P218 1284 aa20.3■□□□□ 0.84
COL16A1-215ENST00000488897 MAGEC2Q9UBF1 373 aaPredicted RBP20.3■□□□□ 0.84
COL16A1-215ENST00000488897 MYO6Q9UM54 1294 aa20.3■□□□□ 0.84
COL16A1-215ENST00000488897 CNTN2Q02246 1040 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 DNAJC7Q99615 494 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 HAUS4Q9H6D7 363 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 TTC26A0AVF1 554 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 RHOBTB3O94955 611 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 ABL1P00519 1130 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 BCRP11274 1271 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 PNKPQ96T60 521 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 CHP1Q99653 195 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 CUEDC2Q9H467 287 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 CAPN11Q9UMQ6 739 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 PCDHA6Q9UN73 950 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 RABGAP1Q9Y3P9 1069 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 PCDHA8Q9Y5H6 950 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 ADGRA2Q96PE1 1338 aa20.29■□□□□ 0.84
COL16A1-215ENST00000488897 PRPHP41219 470 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 GIMAP8Q8ND71 665 aaPredicted RBP20.28■□□□□ 0.84
COL16A1-215ENST00000488897 ZNF507Q8TCN5 953 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 MAGEF1Q9HAY2 307 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 KBTBD4Q9NVX7 518 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 TRIM49BA6NDI0 452 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 KLRC4O43908 158 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 EIF3JO75822 258 aaKnown RBP20.28■□□□□ 0.84
COL16A1-215ENST00000488897 DNM2P50570 870 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 AMPD2Q01433 879 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 DHTKD1Q96HY7 919 aaPredicted RBP20.28■□□□□ 0.84
COL16A1-215ENST00000488897 PSTPIP2Q9H939 334 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 L1RE1Q9UN81 338 aa20.28■□□□□ 0.84
COL16A1-215ENST00000488897 SMARCA1P28370 1054 aa20.27■□□□□ 0.84
COL16A1-215ENST00000488897 BAATQ14032 418 aaPredicted RBP20.27■□□□□ 0.84
COL16A1-215ENST00000488897 CCDC47Q96A33 483 aaKnown RBP20.27■□□□□ 0.84
COL16A1-215ENST00000488897 EXOC4Q96A65 974 aa20.27■□□□□ 0.84
COL16A1-215ENST00000488897 TRIM47Q96LD4 638 aa20.27■□□□□ 0.84
COL16A1-215ENST00000488897 A1CFQ9NQ94 594 aaKnown RBP20.27■□□□□ 0.84
COL16A1-215ENST00000488897 PSD3Q9NYI0 1048 aa20.27■□□□□ 0.84
COL16A1-215ENST00000488897 SLC45A1Q9Y2W3 748 aa20.27■□□□□ 0.84
COL16A1-215ENST00000488897 RPS6P62753 249 aaKnown RBP20.27■□□□□ 0.84
COL16A1-215ENST00000488897 TMEM60Q9H2L4 133 aa20.27■□□□□ 0.84
COL16A1-215ENST00000488897 PES1O00541 588 aaKnown RBP20.26■□□□□ 0.83
COL16A1-215ENST00000488897 MEIS2O14770 477 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 RHOXF2BP0C7M4 288 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 KRT83P78385 493 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 INF2Q27J81 1249 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 ZNF662Q6ZS27 426 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 AK8Q96MA6 479 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 RHOXF2Q9BQY4 288 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 NUP58Q9BVL2 599 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 ABCB6Q9NP58 842 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 GUCA1BQ9UMX6 200 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 REXO2Q9Y3B8 237 aaKnown RBP20.26■□□□□ 0.83
COL16A1-215ENST00000488897 PMS1P54277 932 aaKnown RBP20.26■□□□□ 0.83
COL16A1-215ENST00000488897 ANKRD35Q8N283 1001 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 CD99L2Q8TCZ2 262 aa20.26■□□□□ 0.83
COL16A1-215ENST00000488897 HNRNPH2P55795 449 aaKnown RBP20.25■□□□□ 0.83
COL16A1-215ENST00000488897 MCM6Q14566 821 aa20.25■□□□□ 0.83
COL16A1-215ENST00000488897 TTI2Q6NXR4 508 aa20.25■□□□□ 0.83
COL16A1-215ENST00000488897 RIOX2Q8IUF8 465 aa20.25■□□□□ 0.83
COL16A1-215ENST00000488897 RETREG2Q8NC44 543 aa20.25■□□□□ 0.83
COL16A1-215ENST00000488897 EHBP1Q8NDI1 1231 aa20.25■□□□□ 0.83
COL16A1-215ENST00000488897 ZNF296Q8WUU4 475 aaPredicted RBP20.25■□□□□ 0.83
COL16A1-215ENST00000488897 TAAR1Q96RJ0 339 aa20.25■□□□□ 0.83
COL16A1-215ENST00000488897 BICDL2A1A5D9 508 aa20.25■□□□□ 0.83
COL16A1-215ENST00000488897 PP2D1A8MPX8 630 aa20.25■□□□□ 0.83
COL16A1-215ENST00000488897 H3BQF6 201 aa20.25■□□□□ 0.83
COL16A1-215ENST00000488897 PPP1R2P41236 205 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms