RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 BCAS3Q9H6U6 928 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 RTEL1Q9NZ71 1219 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 VPS9D1Q9Y2B5 631 aa9.83□□□□□ -0.84
PRKCB-208ENST00000487674 SUPT16HQ9Y5B9 1047 aaKnown RBP9.83□□□□□ -0.84
PRKCB-208ENST00000487674 KAT6AQ92794 2004 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 CCDC69A6NI79 296 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 SH2B2O14492 632 aaPredicted RBP9.82□□□□□ -0.84
PRKCB-208ENST00000487674 MEIS2O14770 477 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 PLEKHA8P1O95397 391 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 CALM1P0DP23 149 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 CALM2P0DP24 149 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 CALM3P0DP25 149 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 MCM5P33992 734 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 ADAM17P78536 824 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 ARHGAP4P98171 946 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 SP4Q02446 784 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 USP17L6PQ6QN14 398 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 NFXL1Q6ZNB6 911 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 TMTC2Q8N394 836 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 APBB2Q92870 758 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 GPRASP2Q96D09 838 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 CDHR1Q96JP9 859 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 TMEM87BQ96K49 555 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 SAMD11Q96NU1 681 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 C17orf80Q9BSJ5 609 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 SETD4Q9NVD3 440 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 NRCAMQ92823 1304 aa9.82□□□□□ -0.84
PRKCB-208ENST00000487674 KCNA2P16389 499 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 TCF7P36402 384 aaPredicted RBP9.81□□□□□ -0.84
PRKCB-208ENST00000487674 LIFRP42702 1097 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 PTPROQ16827 1216 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 TIGD5Q53EQ6 642 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 FAM26DQ5JW98 314 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 UTP14CQ5TAP6 766 aaKnown RBP9.81□□□□□ -0.84
PRKCB-208ENST00000487674 TAF2Q6P1X5 1199 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 RPAINQ86UA6 219 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 SRBD1Q8N5C6 995 aaKnown RBP9.81□□□□□ -0.84
PRKCB-208ENST00000487674 TOP1MTQ969P6 601 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 YME1L1Q96TA2 773 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 IFIH1Q9BYX4 1025 aaKnown RBP9.81□□□□□ -0.84
PRKCB-208ENST00000487674 LSG1Q9H089 658 aaKnown RBP9.81□□□□□ -0.84
PRKCB-208ENST00000487674 UBE2ZQ9H832 354 aaPredicted RBP9.81□□□□□ -0.84
PRKCB-208ENST00000487674 PSTPIP2Q9H939 334 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 TELO2Q9Y4R8 837 aa9.81□□□□□ -0.84
PRKCB-208ENST00000487674 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.8□□□□□ -0.84
PRKCB-208ENST00000487674 RBAK-RBAKDNI3L0D1 243 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 ITGB5P18084 799 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 RXRAP19793 462 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 PPFIA1Q13136 1202 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 MTMR1Q13613 665 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 EPC2Q52LR7 807 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 TMTC3Q6ZXV5 915 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 ZNF454Q8N9F8 522 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 MRPL38Q96DV4 380 aaKnown RBP9.8□□□□□ -0.84
PRKCB-208ENST00000487674 OSBPL7Q9BZF2 842 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 ERAP1Q9NZ08 941 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 SLC12A7Q9Y666 1083 aa9.8□□□□□ -0.84
PRKCB-208ENST00000487674 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.79□□□□□ -0.84
PRKCB-208ENST00000487674 MBLAC1A4D2B0 266 aaPredicted RBP9.79□□□□□ -0.84
PRKCB-208ENST00000487674 SPDYE3A6NKU9 549 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 H3BNC9 293 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 SLC27A2O14975 620 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 UPP2O95045 317 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 RPLP2P05387 115 aaKnown RBP9.79□□□□□ -0.84
PRKCB-208ENST00000487674 KCNA5P22460 613 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 PTPN5P54829 565 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 IRX6P78412 446 aaPredicted RBP9.79□□□□□ -0.84
PRKCB-208ENST00000487674 UBE2SQ16763 222 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 LEXMQ3ZCV2 418 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 CREB3L3Q68CJ9 461 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 RUFY4Q6ZNE9 571 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 RSPH3Q86UC2 560 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 TEX2Q8IWB9 1127 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 CMTR1Q8N1G2 835 aaKnown RBP9.79□□□□□ -0.84
PRKCB-208ENST00000487674 SEPT1Q8WYJ6 367 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 ESYT1Q9BSJ8 1104 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 EHMT1Q9H9B1 1298 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 RAPGEFL1Q9UHV5 662 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 TUBE1Q9UJT0 475 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 UBIAD1Q9Y5Z9 338 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 ATG2AQ2TAZ0 1938 aa9.79□□□□□ -0.84
PRKCB-208ENST00000487674 GSTTP1A0A1W2PQM5 241 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 MAFGO15525 162 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 ATP9AO75110 1047 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 CHRNA1P02708 482 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 GHRP10912 638 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 MARK3P27448 753 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 MGAT3Q09327 533 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 GPM6BQ13491 265 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 COL9A3Q14050 684 aaPredicted RBP9.78□□□□□ -0.84
PRKCB-208ENST00000487674 LPIN1Q14693 890 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 GRIK4Q16099 956 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 PPP1R18Q6NYC8 613 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 HEATR3Q7Z4Q2 680 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 SGMS1Q86VZ5 419 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 MICU3Q86XE3 530 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 TMEM192Q8IY95 271 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 FANCBQ8NB91 859 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 GLG1Q92896 1179 aa9.78□□□□□ -0.84
PRKCB-208ENST00000487674 SMARCAD1Q9H4L7 1026 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms