RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 MAFBQ9Y5Q3 323 aaPredicted RBP21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 WDR81Q562E7 1941 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 GRIN2DO15399 1336 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 A0A0U1RQG5 324 aaPredicted RBP21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 PTPN11Q06124 597 aaPredicted RBP21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 ITGA7Q13683 1181 aa21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 MFSD10Q14728 455 aa21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 IL17AQ16552 155 aa21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 NCAPH2Q6IBW4 605 aa21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 GLG1Q92896 1179 aa21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 VTI1AQ96AJ9 217 aa21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 TFIP11Q9UBB9 837 aaKnown RBP21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 STK24Q9Y6E0 443 aa21.79■■□□□ 1.08
PCOLCE-208ENST00000487172 BACH1O14867 736 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 YEATS4O95619 227 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 P4HBP07237 508 aaKnown RBP21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 CDK7P50613 346 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 PSMC6P62333 389 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 KIAA0753Q2KHM9 967 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 NBPF20Q3BBV1 942 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 NFRKBQ6P4R8 1299 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 SESTD1Q86VW0 696 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 TRIM50Q86XT4 487 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 LINC00301Q8NCQ3 95 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 NEK9Q8TD19 979 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 CHMP5Q9NZZ3 219 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 GABBR1Q9UBS5 961 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 IGSF9BQ9UPX0 1349 aa21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 MYH9P35579 1960 aaKnown RBP21.78■■□□□ 1.08
PCOLCE-208ENST00000487172 POTEMA6NI47 508 aa21.77■■□□□ 1.08
PCOLCE-208ENST00000487172 ARVCFO00192 962 aa21.77■■□□□ 1.08
PCOLCE-208ENST00000487172 DKC1O60832 514 aaKnown RBP eCLIP21.77■■□□□ 1.08
PCOLCE-208ENST00000487172 CEBPZQ03701 1054 aaKnown RBP21.77■■□□□ 1.08
PCOLCE-208ENST00000487172 DNM1Q05193 864 aaKnown RBP21.77■■□□□ 1.08
PCOLCE-208ENST00000487172 PDXDC2PQ6P474 469 aa21.77■■□□□ 1.08
PCOLCE-208ENST00000487172 TNPO1Q92973 898 aaKnown RBP21.77■■□□□ 1.08
PCOLCE-208ENST00000487172 HSD17B14Q9BPX1 270 aa21.77■■□□□ 1.08
PCOLCE-208ENST00000487172 SRPRBQ9Y5M8 271 aaKnown RBP21.77■■□□□ 1.08
PCOLCE-208ENST00000487172 PPP6R2O75170 966 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 SLITRK3O94933 977 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 ATP4AP20648 1035 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 QARSP47897 775 aaKnown RBP21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 RGS19P49795 217 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 PSMC5P62195 406 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 STK38Q15208 465 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 FOXD4L6Q3SYB3 417 aaPredicted RBP21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 FOXD4L3Q6VB84 417 aaPredicted RBP21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 ERMNQ8TAM6 284 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 ATP6V0A1Q93050 837 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 AK8Q96MA6 479 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 EIF2AK1Q9BQI3 630 aaKnown RBP21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 RNPEPQ9H4A4 650 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 LRWD1Q9UFC0 647 aa21.76■■□□□ 1.07
PCOLCE-208ENST00000487172 VWA3AA6NCI4 1184 aa21.75■■□□□ 1.07
PCOLCE-208ENST00000487172 KRT85P78386 507 aa21.75■■□□□ 1.07
PCOLCE-208ENST00000487172 PLCB4Q15147 1175 aa21.75■■□□□ 1.07
PCOLCE-208ENST00000487172 ATP8B4Q8TF62 1192 aa21.75■■□□□ 1.07
PCOLCE-208ENST00000487172 TOX2Q96NM4 488 aa21.75■■□□□ 1.07
PCOLCE-208ENST00000487172 POLR3CQ9BUI4 534 aaPredicted RBP21.75■■□□□ 1.07
PCOLCE-208ENST00000487172 RCOR1Q9UKL0 485 aa21.75■■□□□ 1.07
PCOLCE-208ENST00000487172 MROH7Q68CQ1 1323 aa21.75■■□□□ 1.07
PCOLCE-208ENST00000487172 BRCA2P51587 3418 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 SPTLC2O15270 562 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 ZNF862O60290 1169 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 HBP1O60381 514 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 MUTP22033 750 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 HOXC8P31273 242 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 LONP1P36776 959 aaKnown RBP21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 ATN1P54259 1190 aaPredicted RBP21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 UGCGQ16739 394 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 ANKRD33Q7Z3H0 272 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 C4orf19Q8IY42 314 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 C7orf31Q8N865 590 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 BANK1Q8NDB2 785 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 BBXQ8WY36 941 aaPredicted RBP21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 DYDC2Q96IM9 177 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 FAM167AQ96KS9 214 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 HTATIP2Q9BUP3 242 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 ZSWIM4Q9H7M6 989 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 TUFT1Q9NNX1 390 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 RGL1Q9NZL6 768 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 GTF2IRD1Q9UHL9 959 aa21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 FBXO2Q9UK22 296 aaPredicted RBP21.74■■□□□ 1.07
PCOLCE-208ENST00000487172 POTEB3A0JP26 581 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 STBD1O95210 358 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 LYPLA2O95372 231 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 SMIM10L2AP0DMW4 78 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 SMIM10L2BP0DMW5 78 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 MARK3P27448 753 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 RPA1P27694 616 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 MARCKSP29966 332 aaPredicted RBP21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 LRRC26Q2I0M4 334 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 HAUS3Q68CZ6 603 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 POTEBQ6S5H4 581 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 KCNG4Q8TDN1 519 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 LXNQ9BS40 222 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 NRBP2Q9NSY0 501 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 HDAC6Q9UBN7 1215 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 NRCAMQ92823 1304 aa21.73■■□□□ 1.07
PCOLCE-208ENST00000487172 SLC26A4O43511 780 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms