RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZKSCAN5Q9Y2L8 839 aa5.93□□□□□ -1.46
VPS13A-211ENST00000484581 TNKSO95271 1327 aa5.93□□□□□ -1.46
VPS13A-211ENST00000484581 GOLGA6CA6NDK9 693 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 GOLGA6BA6NDN3 693 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 C2orf71A6NGG8 1288 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 WNT9AO14904 365 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 CKMP06732 381 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 GOLGA6DP0CG33 693 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 IFNGR1P15260 489 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 NOP2P46087 812 aaKnown RBP5.92□□□□□ -1.46
VPS13A-211ENST00000484581 BIRC2Q13490 618 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 KIZQ2M2Z5 673 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 ATP13A4Q4VNC1 1196 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 TMEM177Q53S58 311 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 CXorf57Q6NSI4 855 aaKnown RBP5.92□□□□□ -1.46
VPS13A-211ENST00000484581 ZC3H14Q6PJT7 736 aaKnown RBP5.92□□□□□ -1.46
VPS13A-211ENST00000484581 RPTNQ6XPR3 784 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 PRRT2Q7Z6L0 340 aaPredicted RBP5.92□□□□□ -1.46
VPS13A-211ENST00000484581 CHST14Q8NCH0 376 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 JMJD8Q96S16 334 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 RPS6KC1Q96S38 1066 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 RHOBTB2Q9BYZ6 727 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 SLC13A1Q9BZW2 595 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 ARNT2Q9HBZ2 717 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 TNFRSF12AQ9NP84 129 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 EMC7Q9NPA0 242 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 LUC7LQ9NQ29 371 aaKnown RBP5.92□□□□□ -1.46
VPS13A-211ENST00000484581 GOLGA6AQ9NYA3 693 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 PCDHA5Q9Y5H7 936 aa5.92□□□□□ -1.46
VPS13A-211ENST00000484581 TRAF5O00463 557 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 EIF5BO60841 1220 aaKnown RBP5.91□□□□□ -1.46
VPS13A-211ENST00000484581 U2AF1L5P0DN76 240 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-211ENST00000484581 MAPKAPK2P49137 400 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 SEPHS1P49903 392 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 MECP2P51608 486 aaKnown RBP5.91□□□□□ -1.46
VPS13A-211ENST00000484581 ERVK-21P61565 698 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 U2AF1Q01081 240 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS13A-211ENST00000484581 PAK1Q13153 545 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 HDAC1Q13547 482 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-211ENST00000484581 ABCB5Q2M3G0 1257 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 FAM47CQ5HY64 1035 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 EEF1DP3Q658K8 133 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 IQCEQ6IPM2 695 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 C11orf74Q86VG3 221 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 CCDC103Q8IW40 242 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 CBARPQ8N350 705 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-211ENST00000484581 SYT8Q8NBV8 401 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 TMEM52Q8NDY8 209 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 PCDH19Q8TAB3 1148 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 DIO2Q92813 273 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 FCRL3Q96P31 734 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-211ENST00000484581 GPR101Q96P66 508 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-211ENST00000484581 GPRC5CQ9NQ84 441 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 TMEFF2Q9UIK5 374 aaPredicted RBP5.91□□□□□ -1.46
VPS13A-211ENST00000484581 COQ6Q9Y2Z9 468 aa5.91□□□□□ -1.46
VPS13A-211ENST00000484581 TRBV23OR9-2A0A075B6M9 112 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 ZC3H12DA2A288 527 aaKnown RBP5.9□□□□□ -1.46
VPS13A-211ENST00000484581 ARNTLO00327 626 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 MSCO60682 206 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 PLS3P13797 630 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 MVKQ03426 396 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 TARBP2Q15633 366 aaKnown RBP5.9□□□□□ -1.46
VPS13A-211ENST00000484581 PTPN21Q16825 1174 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 GFOD2Q3B7J2 385 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 INAVAQ3KP66 663 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 RTP2Q5QGT7 225 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 JPH3Q8WXH2 748 aaPredicted RBP5.9□□□□□ -1.46
VPS13A-211ENST00000484581 TEPSINQ96N21 525 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 MMP19Q99542 508 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 SLC12A9Q9BXP2 914 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 ZNF700Q9H0M5 742 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 TCF7L1Q9HCS4 588 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 CLEC1BQ9P126 229 aa5.9□□□□□ -1.46
VPS13A-211ENST00000484581 CYBBP04839 570 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 LCP1P13796 627 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 ATP2A2P16615 1042 aaKnown RBP5.89□□□□□ -1.47
VPS13A-211ENST00000484581 ZSCAN20P17040 1043 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-211ENST00000484581 KCNC1P48547 511 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 KPNA1P52294 538 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-211ENST00000484581 SESN3P58005 492 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 KRT85P78386 507 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 ZNF200P98182 395 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-211ENST00000484581 PLEKHN1Q494U1 663 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-211ENST00000484581 TMEM240Q5SV17 173 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 BICRALQ6AI39 1079 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 PAQR3Q6TCH7 311 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 OVCH1Q7RTY7 1134 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 FRMD5Q7Z6J6 570 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 CHTF18Q8WVB6 975 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 SCYL1Q96KG9 808 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 SPTLC3Q9NUV7 552 aa5.89□□□□□ -1.47
VPS13A-211ENST00000484581 THG1LQ9NWX6 298 aaKnown RBP5.89□□□□□ -1.47
VPS13A-211ENST00000484581 NOB1Q9ULX3 412 aaKnown RBP5.89□□□□□ -1.47
VPS13A-211ENST00000484581 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 CCDC66A2RUB6 948 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 FZD9O00144 591 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 GSTA4O15217 222 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 PRPF3O43395 683 aaKnown RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 SOD2P04179 222 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms