RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TUBE1Q9UJT0 475 aa15□□□□□ -0.01
BRAT1-203ENST00000467558 PCDHB4Q9Y5E5 795 aa15□□□□□ -0.01
BRAT1-203ENST00000467558 STAMBPO95630 424 aa15□□□□□ -0.01
BRAT1-203ENST00000467558 NR3C1P04150 777 aa15□□□□□ -0.01
BRAT1-203ENST00000467558 IQCB1Q15051 598 aa15□□□□□ -0.01
BRAT1-203ENST00000467558 KNOP1Q1ED39 458 aaKnown RBP15□□□□□ -0.01
BRAT1-203ENST00000467558 SLFN12LQ6IEE8 588 aa15□□□□□ -0.01
BRAT1-203ENST00000467558 PPP1R2P3Q6NXS1 205 aa15□□□□□ -0.01
BRAT1-203ENST00000467558 ANKRD36BP1Q96IX9 119 aa15□□□□□ -0.01
BRAT1-203ENST00000467558 GDAP1L1Q96MZ0 367 aa15□□□□□ -0.01
BRAT1-203ENST00000467558 ESYT2A0FGR8 921 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 ZNF233A6NK53 670 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 COL23A1Q86Y22 540 aaPredicted RBP14.99□□□□□ -0.01
BRAT1-203ENST00000467558 BANK1Q8NDB2 785 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 AP5M1Q9H0R1 490 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 SAMD15Q9P1V8 674 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 ADAMTS1Q9UHI8 967 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 CNOT7Q9UIV1 285 aaKnown RBP14.99□□□□□ -0.01
BRAT1-203ENST00000467558 TTC16Q8NEE8 873 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 ABHD10Q9NUJ1 306 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 TYW1Q9NV66 732 aaKnown RBP14.99□□□□□ -0.01
BRAT1-203ENST00000467558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.99□□□□□ -0.01
BRAT1-203ENST00000467558 C3P01024 1663 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 WDR46O15213 610 aaKnown RBP14.99□□□□□ -0.01
BRAT1-203ENST00000467558 RNF8O76064 485 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 MESDQ14696 234 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 MICALL2Q8IY33 904 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 ACAD9Q9H845 621 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 ZHX1Q9UKY1 873 aaPredicted RBP14.99□□□□□ -0.01
BRAT1-203ENST00000467558 STAM2O75886 525 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 STAT3P40763 770 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 ZBTB16Q05516 673 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 GABPB1Q06547 395 aaPredicted RBP14.99□□□□□ -0.01
BRAT1-203ENST00000467558 FBXL16Q8N461 479 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 CCDC89Q8N998 374 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 XXYLT1Q8NBI6 393 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 GRK7Q8WTQ7 553 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 FAM167AQ96KS9 214 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 SLC4A9Q96Q91 983 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 RNF181Q9P0P0 153 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 PCDHA13Q9Y5I0 950 aa14.99□□□□□ -0.01
BRAT1-203ENST00000467558 TBX3O15119 743 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 SRGNP10124 158 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 EPHA7Q15375 998 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 SURF1Q15526 300 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 CCDC144BQ3MJ40 725 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 KRT71Q3SY84 523 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 ALKBH5Q6P6C2 394 aaKnown RBP14.98□□□□□ -0.01
BRAT1-203ENST00000467558 CCDC121Q6ZUS5 278 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 EIF2AK1Q9BQI3 630 aaKnown RBP14.98□□□□□ -0.01
BRAT1-203ENST00000467558 PLEKHA4Q9H4M7 779 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 VCPKMTQ9H867 229 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 TCRBV5S4A2TA0A5A2 114 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 OAS2P29728 719 aaKnown RBP14.98□□□□□ -0.01
BRAT1-203ENST00000467558 ZNF653Q96CK0 615 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 BEGAINQ9BUH8 593 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 STIM2Q9P246 746 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 LDHAP00338 332 aaKnown RBP14.98□□□□□ -0.01
BRAT1-203ENST00000467558 IFNB1P01574 187 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 TFAMQ00059 246 aaKnown RBP14.98□□□□□ -0.01
BRAT1-203ENST00000467558 USP49Q70CQ1 688 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 TAOK1Q7L7X3 1001 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 RNF169Q8NCN4 708 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 JMJD4Q9H9V9 463 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 CEP72Q9P209 647 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 PRR12Q9ULL5 1215 aa14.98□□□□□ -0.01
BRAT1-203ENST00000467558 PABPN1LA6NDY0 278 aaKnown RBP14.97□□□□□ -0.01
BRAT1-203ENST00000467558 PSMD14O00487 310 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 UAP1Q16222 522 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-203ENST00000467558 DENND2CQ68D51 928 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 RPAP3Q9H6T3 665 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-203ENST00000467558 ATP6V0A4Q9HBG4 840 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 TLR3O15455 904 aaKnown RBP14.97□□□□□ -0.01
BRAT1-203ENST00000467558 PSMC5P62195 406 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 KCNH2Q12809 1159 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 NEDD9Q14511 834 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 C6orf163Q5TEZ5 329 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 LXNQ9BS40 222 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 SSX2IPQ9Y2D8 614 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 PALM3A6NDB9 673 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-203ENST00000467558 NDUFAB1O14561 156 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 GUCY2FP51841 1108 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 CCDC117Q8IWD4 279 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-203ENST00000467558 ENGASEQ8NFI3 743 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 TCP11Q8WWU5 503 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 KIAA1586Q9HCI6 787 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 A0A1W2PQC6 194 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 TEX33O43247 280 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 EYA4O95677 639 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 SEC23AQ15436 765 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 C3orf67Q6ZVT6 689 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 AGBL3Q8NEM8 1001 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 PLCB1Q9NQ66 1216 aa14.97□□□□□ -0.01
BRAT1-203ENST00000467558 DPYDQ12882 1025 aa14.96□□□□□ -0.01
BRAT1-203ENST00000467558 RSPH3Q86UC2 560 aa14.96□□□□□ -0.01
BRAT1-203ENST00000467558 GOLGA8IPA6NC78 632 aa14.96□□□□□ -0.01
BRAT1-203ENST00000467558 GOLGA8JA6NMD2 632 aa14.96□□□□□ -0.01
BRAT1-203ENST00000467558 SRGAP2CP0DJJ0 459 aa14.96□□□□□ -0.01
BRAT1-203ENST00000467558 CTNNA1P35221 906 aaKnown RBP14.96□□□□□ -0.01
BRAT1-203ENST00000467558 HMGCS2P54868 508 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms