RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 PDE4DQ08499 809 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 SPIRE1Q08AE8 756 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 PPP2R5CQ13362 524 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 TAF1CQ15572 869 aaPredicted RBP9.17□□□□□ -0.94
RPA3-205ENST00000462723 STXBP2Q15833 593 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 FAM110CQ1W6H9 321 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 OTOP1Q7RTM1 612 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 SH3RF1Q7Z6J0 888 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 ZNF598Q86UK7 904 aaKnown RBP9.17□□□□□ -0.94
RPA3-205ENST00000462723 FAM133AQ8N9E0 248 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 ERCC4Q92889 916 aaPredicted RBP9.17□□□□□ -0.94
RPA3-205ENST00000462723 INPP4AQ96PE3 977 aaPredicted RBP9.17□□□□□ -0.94
RPA3-205ENST00000462723 PLIN2Q99541 437 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 LRRC27Q9C0I9 530 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 NAT10Q9H0A0 1025 aaKnown RBP9.17□□□□□ -0.94
RPA3-205ENST00000462723 PORCNQ9H237 461 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 EFCC1Q9HA90 598 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 TUBE1Q9UJT0 475 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 IVNS1ABPQ9Y6Y0 642 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 KIAA1217Q5T5P2 1943 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 PLXNB2O15031 1838 aa9.17□□□□□ -0.94
RPA3-205ENST00000462723 DNAJC25-GNG10A0A024R161 153 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 LOC102724159A0A0B4J2E5 919 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 FAM155AB1AL88 458 aaPredicted RBP9.16□□□□□ -0.94
RPA3-205ENST00000462723 C3orf80F5H4A9 247 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 IGF2BP3O00425 579 aaKnown RBP eCLIP9.16□□□□□ -0.94
RPA3-205ENST00000462723 FOXN1O15353 648 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 CHMP2AO43633 222 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 RNF40O75150 1001 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 PGK2P07205 417 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 RPA1P27694 616 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 MAPK4P31152 587 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 NLRP12P59046 1061 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 GRB10Q13322 594 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 PWP2Q15269 919 aaKnown RBP9.16□□□□□ -0.94
RPA3-205ENST00000462723 ANO6Q4KMQ2 910 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 TMEM119Q4V9L6 283 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 NAALADL2Q58DX5 795 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 HYIQ5T013 277 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 SV2BQ7L1I2 683 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 GRAMD1CQ8IYS0 662 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 ABRAQ8N0Z2 381 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 KCTD17Q8N5Z5 321 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 TRIML1Q8N9V2 468 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 NEK9Q8TD19 979 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 TATDN2Q93075 761 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 PNMA5Q96PV4 448 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 POLR3CQ9BUI4 534 aaPredicted RBP9.16□□□□□ -0.94
RPA3-205ENST00000462723 RBSNQ9H1K0 784 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 GRPEL1Q9HAV7 217 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 CDHR5Q9HBB8 845 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 KBTBD4Q9NVX7 518 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 RMND1Q9NWS8 449 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 PKD2L1Q9P0L9 805 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 PCDHA5Q9Y5H7 936 aa9.16□□□□□ -0.94
RPA3-205ENST00000462723 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 ASTN1O14525 1302 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 LOC100996750A0A140TA64 210 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 SPATA31C2B4DYI2 1134 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 EML1O00423 815 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 BIN1O00499 593 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 DHX15O43143 795 aaKnown RBP9.15□□□□□ -0.94
RPA3-205ENST00000462723 MED24O75448 989 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 WFS1O76024 890 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 MUTP22033 750 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 EDNRBP24530 442 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 YY1P25490 414 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 TM4SF4P48230 202 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 PRSS12P56730 875 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 KRT76Q01546 638 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 DPYDQ12882 1025 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 MAP2K5Q13163 448 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 GRM1Q13255 1194 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 SEMA3FQ13275 785 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 ITGB3BPQ13352 177 aaPredicted RBP9.15□□□□□ -0.94
RPA3-205ENST00000462723 EPHA7Q15375 998 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 NT5DC1Q5TFE4 455 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 PLEKHH3Q7Z736 793 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 CATSPER3Q86XQ3 398 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 RNF214Q8ND24 703 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 SPATA20Q8TB22 786 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 FAM200AQ8TCP9 573 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 LARP4BQ92615 738 aaKnown RBP9.15□□□□□ -0.94
RPA3-205ENST00000462723 RAD54LQ92698 747 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 STAMQ92783 540 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 CCDC47Q96A33 483 aaKnown RBP9.15□□□□□ -0.94
RPA3-205ENST00000462723 GSDMAQ96QA5 445 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 NUDT12Q9BQG2 462 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 EIF2AK1Q9BQI3 630 aaKnown RBP9.15□□□□□ -0.94
RPA3-205ENST00000462723 KRTAP4-6Q9BYQ5 205 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 DNAJC25Q9H1X3 360 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 UNC45AQ9H3U1 944 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 R3HDMLQ9H3Y0 253 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 ZFYVE28Q9HCC9 887 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 TUFT1Q9NNX1 390 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 AAASQ9NRG9 546 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 DACH1Q9UI36 760 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 CPA4Q9UI42 421 aa9.15□□□□□ -0.94
RPA3-205ENST00000462723 KIAA1024Q9UPX6 916 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms