RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 MYCBPAPQ8TBZ2 947 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 TMEM87BQ96K49 555 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 CCT8L2Q96SF2 557 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 PTPN18Q99952 460 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 CLIC4Q9Y696 253 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 WDR19Q8NEZ3 1342 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 F5H6K3 240 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 CA12O43570 354 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 SMNDC1O75940 238 aaKnown RBP eCLIP12.62□□□□□ -0.393e-7■□□□□ 8.5
TRAPPC3-205ENST00000462715 LUC7L3O95232 432 aaKnown RBP12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 KLRC3Q07444 240 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 SKIDA1Q1XH10 827 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 TMEM67Q5HYA8 995 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 GPAT2Q6NUI2 795 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 MIS18BP1Q6P0N0 1132 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 MREGQ8N565 214 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 RASSF8Q8NHQ8 419 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 ANKS1AQ92625 1134 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 TMEM47Q9BQJ4 181 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 TRPC6Q9Y210 931 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 NFE2L3Q9Y4A8 694 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 C5orf60A6NFR6 353 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 HMGB1P1B2RPK0 211 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 PDHXO00330 501 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 WDR46O15213 610 aaKnown RBP12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 RTN3O95197 1032 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 GSTA1P08263 222 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 FERP16591 822 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 OSBPP22059 807 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 DGKZQ13574 1117 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 WTAPQ15007 396 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 TREML2Q5T2D2 321 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 CHST3Q7LGC8 479 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 RPUSD2Q8IZ73 545 aaKnown RBP12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 SPICE1Q8N0Z3 855 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 TCEANC2Q96MN5 208 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 PARK7Q99497 189 aaKnown RBP12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 SAGE1Q9NXZ1 904 aa12.62□□□□□ -0.39
TRAPPC3-205ENST00000462715 USP17L15C9J2P7 530 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 USP17L13C9JLJ4 530 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 USP17L11C9JVI0 530 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 USP17L18D6R9N7 530 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 USP17L22D6RA61 530 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 USP17L17D6RBQ6 530 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 USP17L19D6RCP7 530 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 USP17L20D6RJB6 530 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 PDLIM1O00151 329 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 NDUFB10O96000 172 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 PRLRP16471 622 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 MDH1P40925 334 aaKnown RBP12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 MAGEA8P43361 318 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 ANTXR2P58335 489 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 RBL2Q08999 1139 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 USP17L24Q0WX57 530 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 ANKRD20A8PQ5CZ79 823 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 SLFN13Q68D06 897 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 NCAPH2Q6IBW4 605 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 CUL5Q93034 780 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 CENPHQ9H3R5 247 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 RPAP3Q9H6T3 665 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 SARSP49591 514 aaKnown RBP12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 PDCLQ13371 301 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 SEC23AQ15436 765 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 TAF1CQ15572 869 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 TTMPQ5BVD1 217 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 TEX9Q8N6V9 391 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 PNMA1Q8ND90 353 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 GMCL1Q96IK5 515 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 TANGO6Q9C0B7 1094 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 C15orf41Q9Y2V0 281 aa12.61□□□□□ -0.39
TRAPPC3-205ENST00000462715 PDHBP11177 359 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 ROR2Q01974 943 aaKnown RBP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 MORC3Q14149 939 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 SPECC1Q5M775 1068 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 BZW1Q7L1Q6 419 aaKnown RBP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 ZFYVE28Q9HCC9 887 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 WBP1LQ9NX94 342 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 EME2A4GXA9 379 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 CFAP73A6NFT4 308 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 SLC1A4P43007 532 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 MDM2Q00987 491 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 IFT88Q13099 833 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 CWF19L1Q69YN2 538 aaKnown RBP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 SND1Q7KZF4 910 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 APTXQ7Z2E3 356 aaKnown RBP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 IGDCC4Q8TDY8 1250 aa12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 SMCR8Q8TEV9 937 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC3-205ENST00000462715 MMS19Q96T76 1030 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms