RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CHN1P15882 459 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 RASA1P20936 1047 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 RTP1P59025 263 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 MECOMQ03112 1051 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 DMPKQ09013 629 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 DCTN2Q13561 401 aaKnown RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 SAFBQ15424 915 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 CFAP221Q4G0U5 840 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 MEX3CQ5U5Q3 659 aaKnown RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 ZC3H18Q86VM9 953 aaKnown RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 ALDH16A1Q8IZ83 802 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 TRPC4APQ8TEL6 797 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 MPP4Q96JB8 637 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 IRF2BPLQ9H1B7 796 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 ISCUQ9H1K1 167 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 LIMA1Q9UHB6 759 aaKnown RBP11.65□□□□□ -0.54
LINC00342-202ENST00000448494 PRELID1Q9Y255 219 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 USP20Q9Y2K6 914 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 PLEKHG1Q9ULL1 1385 aa11.65□□□□□ -0.54
LINC00342-202ENST00000448494 F6X3S4 739 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 BOLA2-SMG1P6H3BVE0 249 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 RNF225M0QZC1 329 aaPredicted RBP11.64□□□□□ -0.55
LINC00342-202ENST00000448494 MATN2O00339 956 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 CHL1O00533 1208 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 POLR3DP05423 398 aaPredicted RBP11.64□□□□□ -0.55
LINC00342-202ENST00000448494 HOXD10P28358 340 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 EIF3BP55884 814 aaKnown RBP11.64□□□□□ -0.55
LINC00342-202ENST00000448494 PALB2Q86YC2 1186 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 SLC17A8Q8NDX2 589 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 FNDC8Q8TC99 324 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 LRRC8CQ8TDW0 803 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 FAM227BQ96M60 508 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 LACRTQ9GZZ8 138 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00342-202ENST00000448494 ARL2BPQ9Y2Y0 163 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 HEY1Q9Y5J3 304 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 CAPN6Q9Y6Q1 641 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 CAMSAP1Q5T5Y3 1602 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 N4BP2Q86UW6 1770 aaPredicted RBP11.64□□□□□ -0.55
LINC00342-202ENST00000448494 MMP13P45452 471 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 RAB15P59190 212 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 SPAG1Q07617 926 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 MEA1Q16626 185 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 UNC13DQ70J99 1090 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 ST13P4Q8IZP2 240 aaPredicted RBP11.64□□□□□ -0.55
LINC00342-202ENST00000448494 MDM1Q8TC05 714 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 NELFBQ8WX92 580 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 INPP5DQ92835 1189 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 CCT7Q99832 543 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 STK32BQ9NY57 414 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 SCHIP1Q9P0W5 487 aaPredicted RBP11.64□□□□□ -0.55
LINC00342-202ENST00000448494 NR2E3Q9Y5X4 410 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 MLH3Q9UHC1 1453 aa11.64□□□□□ -0.55
LINC00342-202ENST00000448494 MROH2AA6NES4 1674 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 ESYT3A0FGR9 886 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 GRID2IPA4D2P6 1211 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 CBFA2T3O75081 653 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 SHBGP04278 402 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 MYBP10242 640 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 HSPA8P11142 646 aaKnown RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 ENDOUP21128 410 aaKnown RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 MARCKSP29966 332 aaPredicted RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 KIF23Q02241 960 aaPredicted RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 KIF22Q14807 665 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 SPDYCQ5MJ68 293 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 CATIPQ7Z7H3 387 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 WDR75Q8IWA0 830 aaKnown RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 SLC7A5P1Q8MH63 180 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 CYP4X1Q8N118 509 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 FAM13CQ8NE31 585 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 OR2W6PQ8NHA6 318 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 PPP1R14CQ8TAE6 165 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 SCG3Q8WXD2 468 aaKnown RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 AGXT2Q9BYV1 514 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 ETNK1Q9HBU6 452 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 EURLQ9NYK6 297 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 KIF20BQ96Q89 1820 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 PASKQ96RG2 1323 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 ZFYP08048 801 aaPredicted RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 ETS2P15036 469 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 KCNA2P16389 499 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 GM2AP17900 193 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 EMP3P54852 163 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 CYP4A11Q02928 519 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 ZC2HC1CQ53FD0 456 aaPredicted RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 EAPPQ56P03 285 aaPredicted RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 SNX30Q5VWJ9 437 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 CCDC174Q6PII3 467 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 TTC39CQ8N584 583 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 PPFIBP2Q8ND30 876 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 SPATA20Q8TB22 786 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 ZNF274Q96GC6 653 aaPredicted RBP11.63□□□□□ -0.55
LINC00342-202ENST00000448494 RASAL2Q9UJF2 1139 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
LINC00342-202ENST00000448494 RCCD1A6NED2 376 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 DCDC2CA8MYV0 355 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 PDE5AO76074 875 aa11.62□□□□□ -0.55
LINC00342-202ENST00000448494 AFPP02771 609 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms