RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 ZBTB48P10074 688 aaPredicted RBP24.56■■□□□ 1.52
VSX1-205ENST00000429762 KCTD2Q14681 263 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 FAM26FQ5R3K3 315 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 ANKRD40Q6AI12 368 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 CREBRFQ8IUR6 639 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 P2RX5Q93086 422 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 DHTKD1Q96HY7 919 aaPredicted RBP24.56■■□□□ 1.52
VSX1-205ENST00000429762 SH2D3AQ9BRG2 576 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 SPATA31C2B4DYI2 1134 aa24.55■■□□□ 1.52
VSX1-205ENST00000429762 GNPTABQ3T906 1256 aa24.55■■□□□ 1.52
VSX1-205ENST00000429762 TTI2Q6NXR4 508 aa24.55■■□□□ 1.52
VSX1-205ENST00000429762 TMC6Q7Z403 805 aa24.55■■□□□ 1.52
VSX1-205ENST00000429762 FILIP1Q7Z7B0 1213 aa24.55■■□□□ 1.52
VSX1-205ENST00000429762 GPRC5AQ8NFJ5 357 aa24.55■■□□□ 1.52
VSX1-205ENST00000429762 NEK9Q8TD19 979 aa24.55■■□□□ 1.52
VSX1-205ENST00000429762 DUSP9Q99956 384 aaKnown RBP24.55■■□□□ 1.52
VSX1-205ENST00000429762 SEMA6BQ9H3T3 888 aa24.55■■□□□ 1.52
VSX1-205ENST00000429762 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.55■■□□□ 1.52
VSX1-205ENST00000429762 ZNFX1Q9P2E3 1918 aaKnown RBP24.55■■□□□ 1.52
VSX1-205ENST00000429762 EIF3JO75822 258 aaKnown RBP24.54■■□□□ 1.52
VSX1-205ENST00000429762 CCNE1P24864 410 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 KRT76Q01546 638 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 HS1BP3Q53T59 392 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 SFR1Q86XK3 245 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 RASAL3Q86YV0 1011 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 ADD3Q9UEY8 706 aaKnown RBP24.54■■□□□ 1.52
VSX1-205ENST00000429762 PCDHA2Q9Y5H9 948 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 SFI1A8K8P3 1242 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 GOLGA6L6A8MZA4 724 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 WDR64B1ANS9 1081 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 STAM2O75886 525 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 COPB2P35606 906 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 ZNF157P51786 506 aaPredicted RBP24.54■■□□□ 1.52
VSX1-205ENST00000429762 ARID5BQ14865 1188 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 KCNF1Q9H3M0 494 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 MROH8Q9H579 483 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 ZSWIM4Q9H7M6 989 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 SLC45A1Q9Y2W3 748 aa24.54■■□□□ 1.52
VSX1-205ENST00000429762 FRMD3A2A2Y4 597 aa24.53■■□□□ 1.52
VSX1-205ENST00000429762 EDNRBP24530 442 aa24.53■■□□□ 1.52
VSX1-205ENST00000429762 QARSP47897 775 aaKnown RBP24.53■■□□□ 1.52
VSX1-205ENST00000429762 JAK3P52333 1124 aa24.53■■□□□ 1.52
VSX1-205ENST00000429762 PSMD2Q13200 908 aa24.53■■□□□ 1.52
VSX1-205ENST00000429762 C1orf186Q6ZWK4 172 aa24.53■■□□□ 1.52
VSX1-205ENST00000429762 APTXQ7Z2E3 356 aaKnown RBP24.53■■□□□ 1.52
VSX1-205ENST00000429762 SRRTQ9BXP5 876 aaKnown RBP24.53■■□□□ 1.52
VSX1-205ENST00000429762 JPH1Q9HDC5 661 aaPredicted RBP24.53■■□□□ 1.52
VSX1-205ENST00000429762 ARHGEF35A5YM69 484 aa24.53■■□□□ 1.52
VSX1-205ENST00000429762 MAFGO15525 162 aa24.53■■□□□ 1.52
VSX1-205ENST00000429762 CBFA2T2O43439 604 aa24.53■■□□□ 1.52
VSX1-205ENST00000429762 ECM2O94769 699 aaPredicted RBP24.53■■□□□ 1.52
VSX1-205ENST00000429762 MUTP22033 750 aa24.53■■□□□ 1.52
VSX1-205ENST00000429762 DNAJC25-GNG10A0A024R161 153 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 CASP5P51878 434 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 COBLL1Q53SF7 1204 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 ZNF746Q6NUN9 644 aaPredicted RBP24.52■■□□□ 1.52
VSX1-205ENST00000429762 CYFIP1Q7L576 1253 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 IRF2BP1Q8IU81 584 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 NELFCDQ8IXH7 590 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 CDHR1Q96JP9 859 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 SLC9A2Q9UBY0 812 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 MCM3APO60318 1980 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 WDR81Q562E7 1941 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 PLXNB2O15031 1838 aa24.52■■□□□ 1.52
VSX1-205ENST00000429762 ESPNB1AK53 854 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 KCNJ18B7U540 433 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 TBCAO75347 108 aaKnown RBP24.51■■□□□ 1.51
VSX1-205ENST00000429762 KCNJ12Q14500 433 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 UTP14CQ5TAP6 766 aaKnown RBP24.51■■□□□ 1.51
VSX1-205ENST00000429762 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.51■■□□□ 1.51
VSX1-205ENST00000429762 MYOCDQ8IZQ8 938 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 GUF1Q8N442 669 aaKnown RBP24.51■■□□□ 1.51
VSX1-205ENST00000429762 SHCBP1Q8NEM2 672 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 GTF3C2Q8WUA4 911 aaPredicted RBP24.51■■□□□ 1.51
VSX1-205ENST00000429762 TAB2Q9NYJ8 693 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 NFASCO94856 1347 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 SFNP31947 248 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 KRT31Q15323 416 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 PLA2G4FQ68DD2 849 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 MAEAQ7L5Y9 396 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 KCTD17Q8N5Z5 321 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 CSGALNACT2Q8N6G5 542 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 GTPBP4Q9BZE4 634 aaKnown RBP24.51■■□□□ 1.51
VSX1-205ENST00000429762 GABBR1Q9UBS5 961 aa24.51■■□□□ 1.51
VSX1-205ENST00000429762 ICAM3P32942 547 aa24.5■■□□□ 1.51
VSX1-205ENST00000429762 ACTR2P61160 394 aa24.5■■□□□ 1.51
VSX1-205ENST00000429762 LRMPQ12912 555 aa24.5■■□□□ 1.51
VSX1-205ENST00000429762 ZSCAN30Q86W11 494 aa24.5■■□□□ 1.51
VSX1-205ENST00000429762 SENP7Q9BQF6 1050 aa24.5■■□□□ 1.51
VSX1-205ENST00000429762 PCDHA10Q9Y5I2 948 aa24.5■■□□□ 1.51
VSX1-205ENST00000429762 BICDL2A1A5D9 508 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 TEX33O43247 280 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 MYBP10242 640 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 UBA1P22314 1058 aaKnown RBP24.49■■□□□ 1.51
VSX1-205ENST00000429762 YWHABP31946 246 aaKnown RBP24.49■■□□□ 1.51
VSX1-205ENST00000429762 PSMC5P62195 406 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 TCP11X2Q5H9J9 407 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 CENPPQ6IPU0 288 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 PADI6Q6TGC4 694 aa24.49■■□□□ 1.51
VSX1-205ENST00000429762 PARK7Q99497 189 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms