RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 PKD2L1Q9P0L9 805 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 NFASCO94856 1347 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 WDR64B1ANS9 1081 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 SPATA31C2B4DYI2 1134 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 CCNE2O96020 404 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.29
ACTB-204ENST00000425660 EEF1GP26641 437 aaKnown RBP16.89■□□□□ 0.29
ACTB-204ENST00000425660 ICAM3P32942 547 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 ALDH5A1P51649 535 aaPredicted RBP16.89■□□□□ 0.29
ACTB-204ENST00000425660 CNTN2Q02246 1040 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 STXBP2Q15833 593 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 HERC4Q5GLZ8 1057 aaPredicted RBP16.89■□□□□ 0.29
ACTB-204ENST00000425660 TMC6Q7Z403 805 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 LRRC8AQ8IWT6 810 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 C2orf69Q8N8R5 385 aa16.89■□□□□ 0.29
ACTB-204ENST00000425660 CACTINQ8WUQ7 758 aaKnown RBP16.89■□□□□ 0.29
ACTB-204ENST00000425660 KCNJ18B7U540 433 aa16.88■□□□□ 0.29
ACTB-204ENST00000425660 QARSP47897 775 aaKnown RBP16.88■□□□□ 0.29
ACTB-204ENST00000425660 KCNJ12Q14500 433 aa16.88■□□□□ 0.29
ACTB-204ENST00000425660 KRT31Q15323 416 aa16.88■□□□□ 0.29
ACTB-204ENST00000425660 Q3C1V9 767 aa16.88■□□□□ 0.29
ACTB-204ENST00000425660 MYOCDQ8IZQ8 938 aa16.88■□□□□ 0.29
ACTB-204ENST00000425660 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
ACTB-204ENST00000425660 BANK1Q8NDB2 785 aa16.88■□□□□ 0.29
ACTB-204ENST00000425660 GLIS3Q8NEA6 775 aa16.88■□□□□ 0.29
ACTB-204ENST00000425660 SHCBP1Q8NEM2 672 aa16.88■□□□□ 0.29
ACTB-204ENST00000425660 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
ACTB-204ENST00000425660 POTEB2H3BUK9 544 aa16.87■□□□□ 0.29
ACTB-204ENST00000425660 ZBTB39O15060 712 aa16.87■□□□□ 0.29
ACTB-204ENST00000425660 CELF2O95319 508 aaKnown RBP16.87■□□□□ 0.29
ACTB-204ENST00000425660 ZBTB48P10074 688 aaPredicted RBP16.87■□□□□ 0.29
ACTB-204ENST00000425660 PBX1P40424 430 aa16.87■□□□□ 0.29
ACTB-204ENST00000425660 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
ACTB-204ENST00000425660 ZCWPW2Q504Y3 356 aa16.87■□□□□ 0.29
ACTB-204ENST00000425660 C4orf19Q8IY42 314 aa16.87■□□□□ 0.29
ACTB-204ENST00000425660 SMAP1Q8IYB5 467 aaPredicted RBP16.87■□□□□ 0.29
ACTB-204ENST00000425660 ANKRD20A12PQ8NF67 263 aa16.87■□□□□ 0.29
ACTB-204ENST00000425660 SRRTQ9BXP5 876 aaKnown RBP16.87■□□□□ 0.29
ACTB-204ENST00000425660 MROH8Q9H579 483 aa16.87■□□□□ 0.29
ACTB-204ENST00000425660 OLFML3Q9NRN5 406 aa16.87■□□□□ 0.29
ACTB-204ENST00000425660 DBR1Q9UK59 544 aaKnown RBP16.87■□□□□ 0.29
ACTB-204ENST00000425660 DNAJC25-GNG10A0A024R161 153 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 SOWAHBA6NEL2 793 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 KIF20AO95235 890 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 GUCY2CP25092 1073 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 CLCN1P35523 988 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 ZNF131P52739 623 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 ERVK-9P63128 1117 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 ERVK-24P63145 666 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 RAD51AP2Q09MP3 1159 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 FILIP1LQ4L180 1135 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 SPECC1LQ69YQ0 1117 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 SCFD1Q8WVM8 642 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 FGFBP2Q9BYJ0 223 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 TCEAL9Q9UHQ7 104 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 SAMM50Q9Y512 469 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 COL4A3BPQ9Y5P4 624 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 ITGBL1O95965 494 aaPredicted RBP16.86■□□□□ 0.29
ACTB-204ENST00000425660 GAP43P17677 238 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 PSMC5P62195 406 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 LRMPQ12912 555 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 TBX2Q13207 712 aaPredicted RBP16.86■□□□□ 0.29
ACTB-204ENST00000425660 SPRYD7Q5W111 196 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 EPM2AIP1Q7L775 607 aaPredicted RBP16.86■□□□□ 0.29
ACTB-204ENST00000425660 ANKRD23Q86SG2 305 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 CCDC150Q8NCX0 1101 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 BRI3BPQ8WY22 251 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 R3HDMLQ9H3Y0 253 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 GPBP1L1Q9HC44 474 aaPredicted RBP16.86■□□□□ 0.29
ACTB-204ENST00000425660 ODF2LQ9ULJ1 636 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 PCDHA10Q9Y5I2 948 aa16.86■□□□□ 0.29
ACTB-204ENST00000425660 LOXHD1Q8IVV2 1947 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 BTBD19C9JJ37 291 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 PDHXO00330 501 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 CYP2C8P10632 490 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 FSTL1Q12841 308 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 ARID5BQ14865 1188 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 LRRC41Q15345 812 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 CCL15Q16663 113 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 CST9Q5W186 159 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 FAM114A1Q8IWE2 563 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 KIAA1524Q8TCG1 905 aa16.85■□□□□ 0.29
ACTB-204ENST00000425660 JPH1Q9HDC5 661 aaPredicted RBP16.85■□□□□ 0.29
ACTB-204ENST00000425660 LOC102724159A0A0B4J2E5 919 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 RSPH10B2B2RC85 870 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 TEX33O43247 280 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 TBCAO75347 108 aaKnown RBP16.84■□□□□ 0.29
ACTB-204ENST00000425660 RSPH10BP0C881 870 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 YY1P25490 414 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 RARRES1P49788 294 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 COPB1P53618 953 aaKnown RBP16.84■□□□□ 0.29
ACTB-204ENST00000425660 PWP2Q15269 919 aaKnown RBP16.84■□□□□ 0.29
ACTB-204ENST00000425660 BMT2Q1RMZ1 405 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 ARMCX5Q6P1M9 558 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 LRRC55Q6ZSA7 311 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 SFR1Q86XK3 245 aa16.84■□□□□ 0.29
ACTB-204ENST00000425660 FGD4Q96M96 766 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 594 ms