RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 KIF2BQ8N4N8 673 aa14.74□□□□□ -0.05
LRCH3-203ENST00000425562 PRCCQ92733 491 aaPredicted RBP14.74□□□□□ -0.05
LRCH3-203ENST00000425562 BLOC1S4Q9NUP1 217 aa14.74□□□□□ -0.05
LRCH3-203ENST00000425562 NOC2LQ9Y3T9 749 aaKnown RBP14.74□□□□□ -0.05
LRCH3-203ENST00000425562 COL14A1Q05707 1796 aaKnown RBP14.74□□□□□ -0.05
LRCH3-203ENST00000425562 H0YGN5 161 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 MARCH6O60337 910 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 VIMP08670 466 aaKnown RBP14.73□□□□□ -0.05
LRCH3-203ENST00000425562 LRRC14Q15048 493 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 TCERG1LQ5VWI1 586 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 GJB7Q6PEY0 223 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 DAAM2Q86T65 1068 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 SPATS2Q86XZ4 545 aaKnown RBP14.73□□□□□ -0.05
LRCH3-203ENST00000425562 METTL13Q8N6R0 699 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 SNX29Q8TEQ0 813 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 PIGSQ96S52 555 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 BCS1LQ9Y276 419 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 NFS1Q9Y697 457 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 SLC37A4O43826 429 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 SLC9A1P19634 815 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 GRM4Q14833 912 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 FIGNQ5HY92 759 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 LRRC55Q6ZSA7 311 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 ARFGAP2Q8N6H7 521 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 LARP4BQ92615 738 aaKnown RBP14.73□□□□□ -0.05
LRCH3-203ENST00000425562 ANKS1AQ92625 1134 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 GLG1Q92896 1179 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 COA7Q96BR5 231 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 C7orf25Q9BPX7 421 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 CHORDC1Q9UHD1 332 aaPredicted RBP14.73□□□□□ -0.05
LRCH3-203ENST00000425562 STK38LQ9Y2H1 464 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 COL16A1Q07092 1604 aaPredicted RBP14.73□□□□□ -0.05
LRCH3-203ENST00000425562 F8W031 263 aaPredicted RBP14.73□□□□□ -0.05
LRCH3-203ENST00000425562 RAD21O60216 631 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 ABCB4P21439 1286 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 AMPD3Q01432 767 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 ECM1Q16610 540 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 PPP4R3AQ6IN85 833 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 YTHDF3Q7Z739 585 aaKnown RBP14.73□□□□□ -0.05
LRCH3-203ENST00000425562 SPAG5Q96R06 1193 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 NOD2Q9HC29 1040 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 PLCB1Q9NQ66 1216 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 ATP6V0A2Q9Y487 856 aa14.73□□□□□ -0.05
LRCH3-203ENST00000425562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.73□□□□□ -0.05
LRCH3-203ENST00000425562 A8MUI8 341 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 PJA2O43164 708 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 SERPING1P05155 500 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 PCP11498 1178 aaKnown RBP14.72□□□□□ -0.05
LRCH3-203ENST00000425562 RASA1P20936 1047 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 PICALMQ13492 652 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 NONOQ15233 471 aaKnown RBP eCLIP14.72□□□□□ -0.05
LRCH3-203ENST00000425562 SBK1Q52WX2 424 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 DCAF17Q5H9S7 520 aaPredicted RBP14.72□□□□□ -0.05
LRCH3-203ENST00000425562 TPTE2Q6XPS3 522 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 OTUD6AQ7L8S5 288 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 NSMCE1Q8WV22 266 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 ISCUQ9H1K1 167 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 BARHL2Q9NY43 387 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 THRAP3Q9Y2W1 955 aaKnown RBP14.72□□□□□ -0.05
LRCH3-203ENST00000425562 A6NNZ2 444 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 M0R2N6 131 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 KIF4AO95239 1232 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 CHN1P15882 459 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 TM4SF1P30408 202 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 IFI35P80217 286 aaPredicted RBP14.72□□□□□ -0.05
LRCH3-203ENST00000425562 SLC18A3Q16572 532 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 TUBB8Q3ZCM7 444 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 AADACL2Q6P093 401 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 PNMA5Q96PV4 448 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 EYA3Q99504 573 aa14.72□□□□□ -0.05
LRCH3-203ENST00000425562 LCA5LO95447 670 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 GCFC2P16383 781 aaKnown RBP14.71□□□□□ -0.05
LRCH3-203ENST00000425562 TNFRSF8P28908 595 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 BTDP43251 543 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 TNNI2P48788 182 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 ELF3P78545 371 aaPredicted RBP14.71□□□□□ -0.05
LRCH3-203ENST00000425562 ASIC2Q16515 512 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 PEX26Q7Z412 305 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 DGKHQ86XP1 1220 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 LRRC47Q8N1G4 583 aaKnown RBP14.71□□□□□ -0.05
LRCH3-203ENST00000425562 ARHGEF1Q92888 912 aaKnown RBP14.71□□□□□ -0.05
LRCH3-203ENST00000425562 ANKRD2Q9GZV1 360 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 SEPT11Q9NVA2 429 aaKnown RBP14.71□□□□□ -0.05
LRCH3-203ENST00000425562 SCN7AQ01118 1682 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 USP17L5A8MUK1 530 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 MMEP08473 750 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 PLTPP55058 493 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 ZNF571Q7Z3V5 609 aaPredicted RBP14.71□□□□□ -0.05
LRCH3-203ENST00000425562 NEK8Q86SG6 692 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 RNF10Q8N5U6 811 aaKnown RBP14.71□□□□□ -0.05
LRCH3-203ENST00000425562 KCNV2Q8TDN2 545 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 C8orf37Q96NL8 207 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 BCAS3Q9H6U6 928 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.71□□□□□ -0.052e-7■■■■■ 202.9
LRCH3-203ENST00000425562 COL4A3BPQ9Y5P4 624 aa14.71□□□□□ -0.05
LRCH3-203ENST00000425562 SPATA31A5Q5VU36 1347 aa14.71□□□□□ -0.06
LRCH3-203ENST00000425562 SPATA31A7Q8IWB4 1347 aa14.71□□□□□ -0.06
LRCH3-203ENST00000425562 FGGP02679 453 aa14.7□□□□□ -0.06
LRCH3-203ENST00000425562 CALCRLQ16602 461 aa14.7□□□□□ -0.06
LRCH3-203ENST00000425562 TEX11Q8IYF3 940 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms