RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 EML1O00423 815 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 TLR3O15455 904 aaKnown RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 LGR5O75473 907 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 ATG7O95352 703 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 SMIM10L2AP0DMW4 78 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 SMIM10L2BP0DMW5 78 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 GCFC2P16383 781 aaKnown RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 ATP4AP20648 1035 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 CYP2C18P33260 490 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 MCM7P33993 719 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 MAGEA10P43363 369 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 TOB1P50616 345 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 GNL2Q13823 731 aaKnown RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 ZNF174Q15697 407 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 PTGISQ16647 500 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 UGCGQ16739 394 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 TTC38Q5R3I4 469 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 PRPF38BQ5VTL8 546 aaKnown RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 LARP1BQ659C4 914 aaKnown RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 ZNF746Q6NUN9 644 aaPredicted RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 SWSAP1Q6NVH7 229 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 B3GNT9Q6UX72 402 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 ABHD15Q6UXT9 468 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 TRMT1LQ7Z2T5 733 aaKnown RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 FERMT3Q86UX7 667 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 SESTD1Q86VW0 696 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 NOSTRINQ8IVI9 506 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 C7orf31Q8N865 590 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 DHX38Q92620 1227 aaKnown RBP8.72□□□□□ -1.01
CPSF4-202ENST00000412686 BADQ92934 168 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 TEKT3Q9BXF9 490 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 TBC1D22BQ9NU19 505 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 SETD4Q9NVD3 440 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 VAV3Q9UKW4 847 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 PCDHB8Q9UN66 801 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 SAMM50Q9Y512 469 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 TANC1Q9C0D5 1861 aa8.72□□□□□ -1.01
CPSF4-202ENST00000412686 SCN5AQ14524 2016 aa8.71□□□□□ -1.01
CPSF4-202ENST00000412686 BACH1O14867 736 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 KIAA0355O15063 1070 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 TREHO43280 583 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 NEMFO60524 1076 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 RAG1P15918 1043 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 SYT1P21579 422 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 U2AF2P26368 475 aaKnown RBP eCLIP8.71□□□□□ -1.02
CPSF4-202ENST00000412686 STAT5BP51692 787 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 EPHB4P54760 987 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 CCL23P55773 120 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 IGBP1P78318 339 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 KRT76Q01546 638 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 PTPN11Q06124 597 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-202ENST00000412686 PLCB4Q15147 1175 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 MIS18BP1Q6P0N0 1132 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 LMBR1Q8WVP7 490 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 TRAPPC12Q8WVT3 735 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 INTS4Q96HW7 963 aaKnown RBP8.71□□□□□ -1.02
CPSF4-202ENST00000412686 RIT2Q99578 217 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 NOC4LQ9BVI4 516 aaKnown RBP8.71□□□□□ -1.02
CPSF4-202ENST00000412686 WNT8AQ9H1J5 351 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 SMARCAD1Q9H4L7 1026 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 ZNF302Q9NR11 478 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 DISC1Q9NRI5 854 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 ERAP1Q9NZ08 941 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 GABBR1Q9UBS5 961 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 PRKAG2Q9UGJ0 569 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 ZNF215Q9UL58 517 aaPredicted RBP8.71□□□□□ -1.02
CPSF4-202ENST00000412686 KIF3AQ9Y496 699 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 PCDHB6Q9Y5E3 794 aa8.71□□□□□ -1.02
CPSF4-202ENST00000412686 SIP14410 1827 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 MYH9P35579 1960 aaKnown RBP8.7□□□□□ -1.02
CPSF4-202ENST00000412686 C17orf102A2RUQ5 167 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 TMEM150BA6NC51 233 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 POTEMA6NI47 508 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 WDR64B1ANS9 1081 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 ZNF862O60290 1169 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 MARCH6O60337 910 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 TIMP1P01033 207 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 INSRRP14616 1297 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 HOXC8P31273 242 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 TIE1P35590 1138 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 TXKP42681 527 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 ADAM17P78536 824 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 SPIRE1Q08AE8 756 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 PPFIA1Q13136 1202 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 GRIK4Q16099 956 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 CALCRLQ16602 461 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 NCAPH2Q6IBW4 605 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 PDXDC2PQ6P474 469 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 FAM173BQ6P4H8 233 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 RUFY4Q6ZNE9 571 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 PLPPR4Q7Z2D5 763 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 MIER3Q7Z3K6 550 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 SMAP1Q8IYB5 467 aaPredicted RBP8.7□□□□□ -1.02
CPSF4-202ENST00000412686 BANK1Q8NDB2 785 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 AFAP1L1Q8TED9 768 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 ATP6V0A1Q93050 837 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 SCLYQ96I15 445 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 MTMR9Q96QG7 549 aa8.7□□□□□ -1.02
CPSF4-202ENST00000412686 NAP1L4Q99733 375 aaKnown RBP8.7□□□□□ -1.02
CPSF4-202ENST00000412686 GDF15Q99988 308 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms