RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 PPIL2Q13356 520 aa21.14■□□□□ 0.98
CLDND1-203ENST00000394181 NOC3LQ8WTT2 800 aaKnown RBP21.14■□□□□ 0.98
CLDND1-203ENST00000394181 TUBGCP2Q9BSJ2 902 aa21.14■□□□□ 0.98
CLDND1-203ENST00000394181 ZC3H4Q9UPT8 1303 aaKnown RBP21.14■□□□□ 0.98
CLDND1-203ENST00000394181 RNF225M0QZC1 329 aaPredicted RBP21.14■□□□□ 0.97
CLDND1-203ENST00000394181 CNMDO75829 334 aa21.14■□□□□ 0.97
CLDND1-203ENST00000394181 ZCWPW2Q504Y3 356 aa21.14■□□□□ 0.97
CLDND1-203ENST00000394181 TMEM139Q8IV31 216 aa21.14■□□□□ 0.97
CLDND1-203ENST00000394181 ANKRD20A12PQ8NF67 263 aa21.14■□□□□ 0.97
CLDND1-203ENST00000394181 NACC1Q96RE7 527 aa21.14■□□□□ 0.97
CLDND1-203ENST00000394181 SH2D3AQ9BRG2 576 aa21.14■□□□□ 0.97
CLDND1-203ENST00000394181 TXNRD2Q9NNW7 524 aa21.14■□□□□ 0.97
CLDND1-203ENST00000394181 TRMT1Q9NXH9 659 aaKnown RBP21.14■□□□□ 0.97
CLDND1-203ENST00000394181 MAGEC2Q9UBF1 373 aaPredicted RBP21.14■□□□□ 0.97
CLDND1-203ENST00000394181 B4DLN1 442 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 PES1O00541 588 aaKnown RBP21.13■□□□□ 0.97
CLDND1-203ENST00000394181 HOXD13P35453 343 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 IRX3P78415 501 aaPredicted RBP21.13■□□□□ 0.97
CLDND1-203ENST00000394181 UGCGQ16739 394 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 LDLRAD1Q5T700 205 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 LRRC55Q6ZSA7 311 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 TRMT1LQ7Z2T5 733 aaKnown RBP21.13■□□□□ 0.97
CLDND1-203ENST00000394181 ARMC9Q7Z3E5 817 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 ZNF507Q8TCN5 953 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 TMEM150BA6NC51 233 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 SORBS3O60504 671 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 MYBP10242 640 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 PRKCSHP14314 528 aaPredicted RBP21.13■□□□□ 0.97
CLDND1-203ENST00000394181 HERVK_113P62684 666 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 PNMA8AQ86V59 439 aaPredicted RBP21.13■□□□□ 0.97
CLDND1-203ENST00000394181 ANKRD35Q8N283 1001 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 INPP4AQ96PE3 977 aaPredicted RBP21.13■□□□□ 0.97
CLDND1-203ENST00000394181 SPATC1LQ9H0A9 340 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 TBC1D22BQ9NU19 505 aa21.13■□□□□ 0.97
CLDND1-203ENST00000394181 GYPCP04921 128 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 MIIPQ5JXC2 388 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 E4F1Q66K89 784 aaPredicted RBP21.12■□□□□ 0.97
CLDND1-203ENST00000394181 GPAT2Q6NUI2 795 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 RIOX2Q8IUF8 465 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 MB21D1Q8N884 522 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 KCTD10Q9H3F6 313 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 AGTPBP1Q9UPW5 1226 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 LGALS16A8MUM7 142 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 P4HBP07237 508 aaKnown RBP21.12■□□□□ 0.97
CLDND1-203ENST00000394181 CASP14P31944 242 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 FXR1P51114 621 aaKnown RBP eCLIP21.12■□□□□ 0.97
CLDND1-203ENST00000394181 LRRC63Q05C16 580 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 Q3C1V9 767 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 NCAPG2Q86XI2 1143 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 CHST13Q8NET6 341 aa21.12■□□□□ 0.97
CLDND1-203ENST00000394181 PRPF6O94906 941 aaKnown RBP21.11■□□□□ 0.97
CLDND1-203ENST00000394181 MTIF2P46199 727 aaKnown RBP21.11■□□□□ 0.97
CLDND1-203ENST00000394181 KCNA1Q09470 495 aa21.11■□□□□ 0.97
CLDND1-203ENST00000394181 XRRA1Q6P2D8 792 aa21.11■□□□□ 0.97
CLDND1-203ENST00000394181 KCTD17Q8N5Z5 321 aa21.11■□□□□ 0.97
CLDND1-203ENST00000394181 MOV10L1Q9BXT6 1211 aaKnown RBP21.11■□□□□ 0.97
CLDND1-203ENST00000394181 LOC285556D6RIA3 1793 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 SCN4AP35499 1836 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 DNTTIP2Q5QJE6 756 aaKnown RBP21.1■□□□□ 0.97
CLDND1-203ENST00000394181 EPM2AIP1Q7L775 607 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-203ENST00000394181 IKZF4Q9H2S9 585 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 ZSWIM4Q9H7M6 989 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 RBPJLQ9UBG7 517 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 AKR1B15C9JRZ8 316 aaPredicted RBP21.1■□□□□ 0.97
CLDND1-203ENST00000394181 TBCAO75347 108 aaKnown RBP21.1■□□□□ 0.97
CLDND1-203ENST00000394181 KCNA2P16389 499 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 MUTP22033 750 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 KLK7P49862 253 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 MAEAQ7L5Y9 396 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 PPFIBP1Q86W92 1011 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 CCAR2Q8N163 923 aaKnown RBP21.1■□□□□ 0.97
CLDND1-203ENST00000394181 GPRASP2Q96D09 838 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 SLC10A4Q96EP9 437 aa21.1■□□□□ 0.97
CLDND1-203ENST00000394181 MRPL44Q9H9J2 332 aaKnown RBP21.1■□□□□ 0.97
CLDND1-203ENST00000394181 QARSP47897 775 aaKnown RBP21.09■□□□□ 0.97
CLDND1-203ENST00000394181 SP2Q02086 613 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 MKRN3Q13064 507 aaKnown RBP21.09■□□□□ 0.97
CLDND1-203ENST00000394181 MYCT1Q8N699 235 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 C16orf45Q96MC5 204 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-203ENST00000394181 NOC4LQ9BVI4 516 aaKnown RBP21.09■□□□□ 0.97
CLDND1-203ENST00000394181 ITIH6Q6UXX5 1313 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 LCTP09848 1927 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 NMT1P30419 496 aaKnown RBP21.09■□□□□ 0.97
CLDND1-203ENST00000394181 SP4Q02446 784 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-203ENST00000394181 NLRX1Q86UT6 975 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 FAM114A1Q8IWE2 563 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 TSG101Q99816 390 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 BAG1Q99933 345 aaPredicted RBP21.09■□□□□ 0.97
CLDND1-203ENST00000394181 RRAGCQ9HB90 399 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 COL4A3BPQ9Y5P4 624 aa21.09■□□□□ 0.97
CLDND1-203ENST00000394181 ARHGEF35A5YM69 484 aa21.08■□□□□ 0.97
CLDND1-203ENST00000394181 SOWAHBA6NEL2 793 aa21.08■□□□□ 0.97
CLDND1-203ENST00000394181 FAM13AO94988 1023 aa21.08■□□□□ 0.97
CLDND1-203ENST00000394181 ZC2HC1CQ53FD0 456 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-203ENST00000394181 UTP14CQ5TAP6 766 aaKnown RBP21.08■□□□□ 0.97
CLDND1-203ENST00000394181 PADI6Q6TGC4 694 aa21.08■□□□□ 0.97
CLDND1-203ENST00000394181 KSR1Q8IVT5 923 aa21.08■□□□□ 0.97
CLDND1-203ENST00000394181 DAW1Q8N136 415 aa21.08■□□□□ 0.97
CLDND1-203ENST00000394181 NEK9Q8TD19 979 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms