RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 ARHGEF28Q8N1W1 1705 aaKnown RBP15.84■□□□□ 0.13
PSME4-201ENST00000389993 POC1B-GALNT4F8VUJ3 575 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 TRIM49P0CI25 452 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 TRIM49CP0CI26 452 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 PADI6Q6TGC4 694 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 FMNL3Q8IVF7 1028 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 PALM2Q8IXS6 379 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 GOLGA5Q8TBA6 731 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 SREK1Q8WXA9 508 aaKnown RBP15.84■□□□□ 0.13
PSME4-201ENST00000389993 KCNQ5Q9NR82 932 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 CD163L1Q9NR16 1453 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 FER1L4A9Z1Z3 1794 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 H7C0C1 242 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 K7ERI5 159 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 ATP5OP48047 213 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 KIF11P52732 1056 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 FAM160B2Q86V87 743 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 NUCKS1Q9H1E3 243 aaKnown RBP15.84■□□□□ 0.13
PSME4-201ENST00000389993 INPP5FQ9Y2H2 1132 aa15.84■□□□□ 0.13
PSME4-201ENST00000389993 EEF1GP26641 437 aaKnown RBP15.83■□□□□ 0.13
PSME4-201ENST00000389993 METTL16Q86W50 562 aaKnown RBP15.83■□□□□ 0.13
PSME4-201ENST00000389993 FRMPD1Q5SYB0 1578 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 FDPSP14324 419 aaKnown RBP15.83■□□□□ 0.12
PSME4-201ENST00000389993 NMT1P30419 496 aaKnown RBP15.83■□□□□ 0.12
PSME4-201ENST00000389993 PRELPP51888 382 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 TRIM28Q13263 835 aaKnown RBP15.83■□□□□ 0.12
PSME4-201ENST00000389993 HEXIM2Q96MH2 286 aaKnown RBP15.83■□□□□ 0.12
PSME4-201ENST00000389993 HDAC6Q9UBN7 1215 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 MAD1L1Q9Y6D9 718 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 KDM6AO15550 1401 aaPredicted RBP15.83■□□□□ 0.12
PSME4-201ENST00000389993 NDUFA10O95299 355 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 GAS8O95995 478 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 ZNF131P52739 623 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 CDC25BP30305 580 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 TMEM62Q0P6H9 643 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 LDHDQ86WU2 507 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 CCDC117Q8IWD4 279 aaPredicted RBP15.83■□□□□ 0.12
PSME4-201ENST00000389993 DCLK2Q8N568 766 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 EIF2AK1Q9BQI3 630 aaKnown RBP15.83■□□□□ 0.12
PSME4-201ENST00000389993 LXNQ9BS40 222 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 CUEDC2Q9H467 287 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 SMIM22K7EJ46 135 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 ADRA2BP18089 450 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 MTMR4Q9NYA4 1195 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 HESX1Q9UBX0 185 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 TBK1Q9UHD2 729 aa15.83■□□□□ 0.12
PSME4-201ENST00000389993 FMR1Q06787 632 aaKnown RBP eCLIP15.82■□□□□ 0.126e-7■□□□□ 9.7
PSME4-201ENST00000389993 SF3B3Q15393 1217 aaKnown RBP15.82■□□□□ 0.12
PSME4-201ENST00000389993 HSPH1Q92598 858 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 GAP43P17677 238 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 CCNA1P78396 465 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 MAGOHBQ96A72 148 aaKnown RBP15.82■□□□□ 0.12
PSME4-201ENST00000389993 CRCPO75575 148 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 MXI1P50539 228 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 RNASELQ05823 741 aaKnown RBP15.82■□□□□ 0.12
PSME4-201ENST00000389993 HAUS4Q9H6D7 363 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 SH3GLB2Q9NR46 395 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 FEM1BQ9UK73 627 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 LRRC53A6NM62 1247 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 FBXO2Q9UK22 296 aaPredicted RBP15.82■□□□□ 0.12
PSME4-201ENST00000389993 WHAMMP3Q1A5X7 153 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 HHATQ5VTY9 493 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 RETREG2Q8NC44 543 aa15.82■□□□□ 0.12
PSME4-201ENST00000389993 ZKSCAN4Q969J2 545 aaPredicted RBP15.82■□□□□ 0.12
PSME4-201ENST00000389993 ZNF18P17022 549 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 RASA1P20936 1047 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 KLK7P49862 253 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 TFDP1Q14186 410 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 MCTP2Q6DN12 878 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 THAP9Q9H5L6 903 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.81■□□□□ 0.12
PSME4-201ENST00000389993 IPO5O00410 1097 aaKnown RBP15.81■□□□□ 0.12
PSME4-201ENST00000389993 SLC30A10Q6XR72 485 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 CALN1Q9BXU9 219 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.81■□□□□ 0.12
PSME4-201ENST00000389993 STK10O94804 968 aaKnown RBP15.81■□□□□ 0.12
PSME4-201ENST00000389993 NDUFB10O96000 172 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 IFNAR2P48551 515 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 NFIAQ12857 509 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 BFSP1Q12934 665 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 HP1BP3Q5SSJ5 553 aaPredicted RBP15.81■□□□□ 0.12
PSME4-201ENST00000389993 NCOA3Q9Y6Q9 1424 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 INTS8Q75QN2 995 aaKnown RBP15.81■□□□□ 0.12
PSME4-201ENST00000389993 HEMGNQ9BXL5 484 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 TFR2Q9UP52 801 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 PNPLA7Q6ZV29 1317 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 MYO1FO00160 1098 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 IVLP07476 585 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 PLTPP55058 493 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 ALX1Q15699 326 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 CYP4F22Q6NT55 531 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 CCDC13Q8IYE1 715 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 AGBL1Q96MI9 1066 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 TMEM60Q9H2L4 133 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 FBXO28Q9NVF7 368 aa15.81■□□□□ 0.12
PSME4-201ENST00000389993 ZNF70Q9UC06 446 aaPredicted RBP15.81■□□□□ 0.12
PSME4-201ENST00000389993 DENND3A2RUS2 1198 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 DEPDC5O75140 1603 aa15.8■□□□□ 0.12
PSME4-201ENST00000389993 N4BP1O75113 896 aaKnown RBP15.8■□□□□ 0.12
PSME4-201ENST00000389993 SLURP2P0DP57 97 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms