RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 PALLDQ8WX93 1383 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 SLC16A4O15374 487 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 KCNH2Q12809 1159 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 AOC3Q16853 763 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 CCDC14Q49A88 953 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 SYDE2Q5VT97 1194 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 SLC30A10Q6XR72 485 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 RNF25Q96BH1 459 aaPredicted RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 DDX23Q9BUQ8 820 aaKnown RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 NUCKS1Q9H1E3 243 aaKnown RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 TSR3Q9UJK0 312 aaKnown RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 ADGRG1Q9Y653 693 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 QRICH2Q9H0J4 1663 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 SPDYE16A6NNV3 312 aaPredicted RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 FDPSP14324 419 aaKnown RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 GBP1P32455 592 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 SERPINB6P35237 376 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 GUCY1A3Q02108 690 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 SPDYE2Q495Y8 402 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 TRIM50Q86XT4 487 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 LRRC8CQ8TDW0 803 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 PARVGQ9HBI0 331 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 MED4Q9NPJ6 270 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 HOMER3Q9NSC5 361 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 JRKLQ9Y4A0 524 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 KRT1P04264 644 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 ARPP19P56211 112 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 IQCB1Q15051 598 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 NUGGCQ68CJ6 796 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 RASGRP2Q7LDG7 609 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 STAG1Q8WVM7 1258 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 FAM49AQ9H0Q0 323 aaPredicted RBP5.4□□□□□ -1.54
LTN1-202ENST00000389194 GLI2P10070 1586 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 PI4K2BG5E9Z4 385 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 AKR1B1P15121 316 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 CASP2P42575 452 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 EPHB4P54760 987 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 ANTXR2P58335 489 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 CCZ1BP86790 482 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 CCZ1P86791 482 aaPredicted RBP5.4□□□□□ -1.54
LTN1-202ENST00000389194 COL9A3Q14050 684 aaPredicted RBP5.4□□□□□ -1.54
LTN1-202ENST00000389194 ASPRV1Q53RT3 343 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 PPP6R3Q5H9R7 873 aaPredicted RBP5.4□□□□□ -1.54
LTN1-202ENST00000389194 DYDC2Q96IM9 177 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 FAM84BQ96KN1 310 aaPredicted RBP5.4□□□□□ -1.54
LTN1-202ENST00000389194 FMO2Q99518 471 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 CDCA7Q9BWT1 371 aaPredicted RBP5.4□□□□□ -1.54
LTN1-202ENST00000389194 GLT8D2Q9H1C3 349 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 PLCB1Q9NQ66 1216 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 ANAPC5Q9UJX4 755 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 DNAJC12Q9UKB3 198 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 ZCCHC11Q5TAX3 1644 aaKnown RBP5.4□□□□□ -1.54
LTN1-202ENST00000389194 MAP3K4Q9Y6R4 1608 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 MXI1P50539 228 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 BEND6Q5SZJ8 279 aaPredicted RBP5.4□□□□□ -1.54
LTN1-202ENST00000389194 SPOUT1Q5T280 376 aaKnown RBP5.4□□□□□ -1.54
LTN1-202ENST00000389194 AGR3Q8TD06 166 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 RPGRIP1Q96KN7 1286 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 PANX2Q96RD6 677 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 LRRC1Q9BTT6 524 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 PCSK1NQ9UHG2 260 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 PCDHA6Q9UN73 950 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 PCDHA8Q9Y5H6 950 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 CSADQ9Y600 493 aa5.4□□□□□ -1.54
LTN1-202ENST00000389194 ADCY10Q96PN6 1610 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 CCDC195A0A1B0GUA6 201 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 PLEKP08567 350 aaPredicted RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 MAGOHP61326 146 aaKnown RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 IL1RL1Q01638 556 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 DR1Q01658 176 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 PFKFB3Q16875 520 aaPredicted RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 RAPH1Q70E73 1250 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 MYLK4Q86YV6 388 aaPredicted RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 GLYCTKQ8IVS8 523 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 SLC30A5Q8TAD4 765 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 PPP1R36Q96LQ0 422 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 BSDC1Q9NW68 430 aaPredicted RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 AMACRQ9UHK6 382 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 DUSP10Q9Y6W6 482 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 PASKQ96RG2 1323 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 MYO1CO00159 1063 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 SEMA3EO15041 775 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 CYP19A1P11511 503 aaPredicted RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 NMT1P30419 496 aaKnown RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 COASYQ13057 564 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 DDX42Q86XP3 938 aaKnown RBP eCLIP5.4□□□□□ -1.55
LTN1-202ENST00000389194 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 ADGRF4Q8IZF3 695 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 LRRN4CLQ8ND94 238 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 C1orf54Q8WWF1 131 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 ARHGEF1Q92888 912 aaKnown RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 GINM1Q9NU53 330 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 PARP2Q9UGN5 583 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 DCTN4Q9UJW0 460 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 ANAPC7Q9UJX3 599 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.4□□□□□ -1.55
LTN1-202ENST00000389194 ABCC3O15438 1527 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 E2F8A0AVK6 867 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 CCDC78A2IDD5 438 aa5.4□□□□□ -1.55
LTN1-202ENST00000389194 WTIPA6NIX2 430 aaPredicted RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms