RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 XDHP47989 1333 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 TTLL1O95922 423 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 FTCDO95954 541 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 IFNAR2P48551 515 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 ORC2Q13416 577 aaPredicted RBP9.1□□□□□ -0.95
VPS36-201ENST00000378060 XKR9Q5GH70 373 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 TTC19Q6DKK2 380 aaPredicted RBP9.1□□□□□ -0.95
VPS36-201ENST00000378060 CASC4Q6P4E1 433 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 DHX40Q8IX18 779 aaKnown RBP9.1□□□□□ -0.95
VPS36-201ENST00000378060 GBP7Q8N8V2 638 aaPredicted RBP9.1□□□□□ -0.95
VPS36-201ENST00000378060 SMCR8Q8TEV9 937 aaPredicted RBP9.1□□□□□ -0.95
VPS36-201ENST00000378060 CCT6BQ92526 530 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 KLHL29Q96CT2 875 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 PVALEFA0A1B0GWK0 134 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 RNF8O76064 485 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 MCAMP43121 646 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 LIG4P49917 911 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 DYNLL1P63167 89 aaKnown RBP9.1□□□□□ -0.95
VPS36-201ENST00000378060 CYP4A11Q02928 519 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 DLGAP5Q15398 846 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 PTPROQ16827 1216 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 C6orf118Q5T5N4 469 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 UNC13DQ70J99 1090 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 CACNA1SQ13698 1873 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.1□□□□□ -0.95
VPS36-201ENST00000378060 WTIPA6NIX2 430 aaPredicted RBP9.1□□□□□ -0.95
VPS36-201ENST00000378060 TMEM232C9JQI7 657 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 GIPC1O14908 333 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 TADA3O75528 432 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 ECEL1O95672 775 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 LRRC41Q15345 812 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 GEN1Q17RS7 908 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 MMS22LQ6ZRQ5 1243 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 TADA2BQ86TJ2 420 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 TRIM42Q8IWZ5 723 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 FAM133AQ8N9E0 248 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 CCHCR1Q8TD31 782 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 NACC1Q96RE7 527 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 TUBB6Q9BUF5 446 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.1□□□□□ -0.95
VPS36-201ENST00000378060 ANKRD31Q8N7Z5 1873 aa9.1□□□□□ -0.95
VPS36-201ENST00000378060 A0A1W2PQC6 194 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 H0YIN7 160 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 PRPF6O94906 941 aaKnown RBP9.09□□□□□ -0.95
VPS36-201ENST00000378060 ATF7P17544 494 aaPredicted RBP9.09□□□□□ -0.95
VPS36-201ENST00000378060 MAP7Q14244 749 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 SH2D4BQ5SQS7 431 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 FAM102BQ5T8I3 360 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 TMC4Q7Z404 712 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 CCDC127Q96BQ5 260 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 DDX23Q9BUQ8 820 aaKnown RBP9.09□□□□□ -0.95
VPS36-201ENST00000378060 EDEM3Q9BZQ6 932 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 TMEM206Q9H813 350 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 MRFAP1Q9Y605 127 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 TXNDC9O14530 226 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 RASGRF2O14827 1237 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 ADCY2Q08462 1091 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 TRIM28Q13263 835 aaKnown RBP9.09□□□□□ -0.95
VPS36-201ENST00000378060 DMP1Q13316 513 aaPredicted RBP9.09□□□□□ -0.95
VPS36-201ENST00000378060 LRCH2Q5VUJ6 765 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 RHOT2Q8IXI1 618 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 TCP11Q8WWU5 503 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 GJB4Q9NTQ9 266 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 ADAMTS1Q9UHI8 967 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 NOVA2Q9UNW9 492 aaKnown RBP9.09□□□□□ -0.95
VPS36-201ENST00000378060 GDAQ9Y2T3 454 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 LRRD1A4D1F6 860 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 USP27XA6NNY8 438 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 ABCD1P33897 745 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 ARHGAP4P98171 946 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 EXOSC10Q01780 885 aaKnown RBP9.09□□□□□ -0.95
VPS36-201ENST00000378060 CALR3Q96L12 384 aaKnown RBP9.09□□□□□ -0.95
VPS36-201ENST00000378060 Q9H521 79 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 KANSL2Q9H9L4 492 aa9.09□□□□□ -0.95
VPS36-201ENST00000378060 QSER1Q2KHR3 1735 aa9.09□□□□□ -0.96
VPS36-201ENST00000378060 SNAP23O00161 211 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 PODXLO00592 558 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 KRT19P08727 400 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 NAA30Q147X3 362 aaPredicted RBP9.08□□□□□ -0.96
VPS36-201ENST00000378060 NBPF9Q3BBW0 867 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 SGO2Q562F6 1265 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 ZBTB8OSQ8IWT0 167 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 ANKRD7Q92527 254 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 RUBCNQ92622 972 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 ZNF653Q96CK0 615 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 CEP72Q9P209 647 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 SERPINB13Q9UIV8 391 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 MIF4GDA9UHW6 222 aaKnown RBP9.08□□□□□ -0.96
VPS36-201ENST00000378060 MYCNP04198 464 aaPredicted RBP9.08□□□□□ -0.96
VPS36-201ENST00000378060 PLA2G4BP0C869 781 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 PFKFB3Q16875 520 aaPredicted RBP9.08□□□□□ -0.96
VPS36-201ENST00000378060 TBC1D10CQ8IV04 446 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 MAP7D3Q8IWC1 876 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 CFAP61Q8NHU2 1237 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 ACCSQ96QU6 501 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 PIGSQ96S52 555 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.08□□□□□ -0.96
VPS36-201ENST00000378060 MRPL47Q9HD33 250 aaKnown RBP9.08□□□□□ -0.96
VPS36-201ENST00000378060 TXLNGQ9NUQ3 528 aa9.08□□□□□ -0.96
VPS36-201ENST00000378060 GCNT4Q9P109 453 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms