RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 GTF2IRD1Q9UHL9 959 aa22.42■■□□□ 1.18
DDR1-228ENST00000376575 CHMP2AO43633 222 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 BRD1O95696 1058 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 TXKP42681 527 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 ADAM17P78536 824 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 FAAP100Q0VG06 881 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 HIC1Q14526 733 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 FAM160B1Q5W0V3 765 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 MIER3Q7Z3K6 550 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 GLG1Q92896 1179 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 ZDHHC9Q9Y397 364 aa22.41■■□□□ 1.18
DDR1-228ENST00000376575 TRIP12Q14669 1992 aaPredicted RBP22.41■■□□□ 1.18
DDR1-228ENST00000376575 MYH15Q9Y2K3 1946 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 MARCH6O60337 910 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 B4GALT4O60513 344 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 PQBP1O60828 265 aaKnown RBP22.4■■□□□ 1.18
DDR1-228ENST00000376575 F13A1P00488 732 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 FXR2P51116 673 aaKnown RBP eCLIP22.4■■□□□ 1.183e-6■■■□□ 17.5
DDR1-228ENST00000376575 PLCB4Q15147 1175 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 EPHA7Q15375 998 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 IL17AQ16552 155 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 PPP1R13LQ8WUF5 828 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 GABBR1Q9UBS5 961 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 ATP11BQ9Y2G3 1177 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 SAMM50Q9Y512 469 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 MORC2Q9Y6X9 1032 aaPredicted RBP22.4■■□□□ 1.18
DDR1-228ENST00000376575 KAT6AQ92794 2004 aa22.4■■□□□ 1.18
DDR1-228ENST00000376575 ZNF862O60290 1169 aa22.39■■□□□ 1.17
DDR1-228ENST00000376575 EVI5O60447 810 aa22.39■■□□□ 1.17
DDR1-228ENST00000376575 SMIM10L2AP0DMW4 78 aa22.39■■□□□ 1.17
DDR1-228ENST00000376575 SMIM10L2BP0DMW5 78 aa22.39■■□□□ 1.17
DDR1-228ENST00000376575 ARL6IP4Q66PJ3 421 aaKnown RBP22.39■■□□□ 1.17
DDR1-228ENST00000376575 GDF6Q6KF10 455 aaPredicted RBP22.39■■□□□ 1.17
DDR1-228ENST00000376575 PDXDC2PQ6P474 469 aa22.39■■□□□ 1.17
DDR1-228ENST00000376575 FAM173BQ6P4H8 233 aa22.39■■□□□ 1.17
DDR1-228ENST00000376575 C7orf31Q8N865 590 aa22.39■■□□□ 1.17
DDR1-228ENST00000376575 DPF3Q92784 378 aa22.39■■□□□ 1.17
DDR1-228ENST00000376575 HSD17B14Q9BPX1 270 aa22.39■■□□□ 1.17
DDR1-228ENST00000376575 TRMT13Q9NUP7 481 aaKnown RBP22.39■■□□□ 1.17
DDR1-228ENST00000376575 NRCAMQ92823 1304 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 DCDC2CA8MYV0 355 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 BACH1O14867 736 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 STBD1O95210 358 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 BMP15O95972 392 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 PDIA5Q14554 519 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 PTPAQ15257 358 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 UGCGQ16739 394 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 IGSF22Q8N9C0 903 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 ATP8B4Q8TF62 1192 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 TRPV6Q9H1D0 765 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 PDLIM7Q9NR12 457 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 TBX21Q9UL17 535 aa22.38■■□□□ 1.17
DDR1-228ENST00000376575 ZBTB42B2RXF5 422 aa22.37■■□□□ 1.17
DDR1-228ENST00000376575 KIAA0355O15063 1070 aa22.37■■□□□ 1.17
DDR1-228ENST00000376575 P4HBP07237 508 aaKnown RBP22.37■■□□□ 1.17
DDR1-228ENST00000376575 CLTBP09497 229 aa22.37■■□□□ 1.17
DDR1-228ENST00000376575 MARK3P27448 753 aa22.37■■□□□ 1.17
DDR1-228ENST00000376575 TECP42680 631 aa22.37■■□□□ 1.17
DDR1-228ENST00000376575 SF3A1Q15459 793 aaKnown RBP22.37■■□□□ 1.17
DDR1-228ENST00000376575 CLIC4Q9Y696 253 aa22.37■■□□□ 1.17
DDR1-228ENST00000376575 CEP290O15078 2479 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 POTEB3A0JP26 581 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 MBLAC1A4D2B0 266 aaPredicted RBP22.36■■□□□ 1.17
DDR1-228ENST00000376575 POTEMA6NI47 508 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 TLR3O15455 904 aaKnown RBP22.36■■□□□ 1.17
DDR1-228ENST00000376575 HBP1O60381 514 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 SLITRK3O94933 977 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 ANP32AP39687 249 aaKnown RBP22.36■■□□□ 1.17
DDR1-228ENST00000376575 PSMC5P62195 406 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 FAM47CQ5HY64 1035 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 MARCH8Q5T0T0 291 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 NCAPH2Q6IBW4 605 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 POTEBQ6S5H4 581 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 C7orf61Q8IZ16 206 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 LMBR1Q8WVP7 490 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 BBXQ8WY36 941 aaPredicted RBP22.36■■□□□ 1.17
DDR1-228ENST00000376575 ATP6V0A1Q93050 837 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 FTOQ9C0B1 505 aaKnown RBP eCLIP22.36■■□□□ 1.17
DDR1-228ENST00000376575 SETD4Q9NVD3 440 aa22.36■■□□□ 1.17
DDR1-228ENST00000376575 WRAP73Q9P2S5 460 aaPredicted RBP22.36■■□□□ 1.17
DDR1-228ENST00000376575 C17orf102A2RUQ5 167 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 TRIM43BA6NCK2 446 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 INSRRP14616 1297 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 QARSP47897 775 aaKnown RBP22.35■■□□□ 1.17
DDR1-228ENST00000376575 NASPP49321 788 aaPredicted RBP22.35■■□□□ 1.17
DDR1-228ENST00000376575 CHMP4BP1P59074 171 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 ZNF200P98182 395 aaPredicted RBP22.35■■□□□ 1.17
DDR1-228ENST00000376575 PPFIA1Q13136 1202 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 PTGISQ16647 500 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 SH3RF1Q7Z6J0 888 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 NEK9Q8TD19 979 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 TNPO1Q92973 898 aaKnown RBP22.35■■□□□ 1.17
DDR1-228ENST00000376575 TRIM43Q96BQ3 446 aaPredicted RBP22.35■■□□□ 1.17
DDR1-228ENST00000376575 FAM167AQ96KS9 214 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 USP28Q96RU2 1077 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 EIF2AK1Q9BQI3 630 aaKnown RBP22.35■■□□□ 1.17
DDR1-228ENST00000376575 TSHZ2Q9NRE2 1034 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 RGL1Q9NZL6 768 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 CEP131Q9UPN4 1083 aa22.35■■□□□ 1.17
DDR1-228ENST00000376575 NR2E3Q9Y5X4 410 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms