RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 ATP1A3P13637 1013 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 MUM1Q2TAK8 710 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 IPO11Q9UI26 975 aaKnown RBP18.55■□□□□ 0.56
MCF2L-203ENST00000375604 IGKV5-2P06315 115 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 MYO1EQ12965 1108 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 RHPN2Q8IUC4 686 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 MAP7D3Q8IWC1 876 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 IQCDQ96DY2 449 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 CEP95Q96GE4 821 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 TMEM206Q9H813 350 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 ANKARQ7Z5J8 1434 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 CDC42BPGQ6DT37 1551 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 LRRD1A4D1F6 860 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 RMDN3Q96TC7 470 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 MTRQ99707 1265 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 RESTQ13127 1097 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 AK8Q96MA6 479 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 STRBPQ96SI9 672 aaKnown RBP18.54■□□□□ 0.56
MCF2L-203ENST00000375604 HAUS4Q9H6D7 363 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 XPOTO43592 962 aaKnown RBP18.54■□□□□ 0.56
MCF2L-203ENST00000375604 RWDD2AQ9UIY3 292 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 GOLGA8MH3BSY2 632 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 K7ERI5 159 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 MCF2LO15068 1137 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 BRD3Q15059 726 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 ANO4Q32M45 955 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 DEPDC1BQ8WUY9 529 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 CPDO75976 1380 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 PP2D1A8MPX8 630 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 RNF217Q8TC41 542 aa18.54■□□□□ 0.56
MCF2L-203ENST00000375604 TOM1L1O75674 476 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 HEXIM1O94992 359 aaKnown RBP18.53■□□□□ 0.56
MCF2L-203ENST00000375604 PRAMEF18Q5VWM3 479 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 CATSPER4Q7RTX7 472 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 TMEM47Q9BQJ4 181 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 HACD3Q9P035 362 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 SRPRBQ9Y5M8 271 aaKnown RBP18.53■□□□□ 0.56
MCF2L-203ENST00000375604 NPHP3-ACAD11A0A0J9YXS1 232 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 PRPSAP2O60256 369 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 TCP11X2Q5H9J9 407 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 FAM71BQ8TC56 605 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 FAM213AQ9BRX8 229 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 H7C1W4 665 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 RPS6KA4O75676 772 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 MUM1L1Q5H9M0 696 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 ARHGAP24Q8N264 748 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 C2orf69Q8N8R5 385 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 HEMGNQ9BXL5 484 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 SRGAP2O75044 1071 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 CLTAP09496 248 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 TCP1P17987 556 aaKnown RBP18.53■□□□□ 0.56
MCF2L-203ENST00000375604 TOB2Q14106 344 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-203ENST00000375604 CDKL2Q92772 493 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 SPDL1Q96EA4 605 aa18.53■□□□□ 0.56
MCF2L-203ENST00000375604 A0A0G2JLW4 131 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 LIG3P49916 1009 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 CFAP61Q8NHU2 1237 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 DDX27Q96GQ7 796 aaKnown RBP18.52■□□□□ 0.56
MCF2L-203ENST00000375604 GOLPH3LQ9H4A5 285 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 CD209Q9NNX6 404 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 A0A1W2PQ27 194 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 A0A1W2PQ64 194 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 A0A1W2PQD8 194 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 SLFN14P0C7P3 912 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 ARL4AP40617 200 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 MXI1P50539 228 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 THOC5Q13769 683 aaKnown RBP18.52■□□□□ 0.56
MCF2L-203ENST00000375604 PDCD6IPQ8WUM4 868 aaKnown RBP18.52■□□□□ 0.56
MCF2L-203ENST00000375604 VCXQ9H320 206 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 OPHN1O60890 802 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 PPP6R3Q5H9R7 873 aaPredicted RBP18.52■□□□□ 0.56
MCF2L-203ENST00000375604 SWSAP1Q6NVH7 229 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 SCN4BQ8IWT1 228 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 RNF139Q8WU17 664 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 MED7O43513 233 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 NSUN2Q08J23 767 aaKnown RBP eCLIP18.52■□□□□ 0.56
MCF2L-203ENST00000375604 IFT122Q9HBG6 1241 aa18.52■□□□□ 0.56
MCF2L-203ENST00000375604 TRAPPC10P48553 1259 aa18.52■□□□□ 0.55
MCF2L-203ENST00000375604 TSNAXIP1Q2TAA8 658 aa18.52■□□□□ 0.55
MCF2L-203ENST00000375604 PLS3P13797 630 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 BPIFB4P59827 614 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 SFR1Q86XK3 245 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 SH2D3AQ9BRG2 576 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 EPHB1P54762 984 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 TMEM179Q6ZVK1 233 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 GBP7Q8N8V2 638 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-203ENST00000375604 MRFAP1L1Q96HT8 127 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 SOX5P35711 763 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 NCAPGQ9BPX3 1015 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 MIS12Q9H081 205 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 ECEL1O95672 775 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 PSMA2P25787 234 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 GCLMP48507 274 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 IQCB1Q15051 598 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 FAM133BQ5BKY9 247 aaKnown RBP18.51■□□□□ 0.55
MCF2L-203ENST00000375604 CROCCP2Q86T23 111 aa18.51■□□□□ 0.55
MCF2L-203ENST00000375604 TRMT2AQ8IZ69 625 aaKnown RBP18.51■□□□□ 0.55
MCF2L-203ENST00000375604 BCAS4Q8TDM0 211 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms