RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TMCO1Q9UM00 188 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 GMEB1Q9Y692 573 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 BZW2Q9Y6E2 419 aaKnown RBP10.41□□□□□ -0.74
SF3A3-201ENST00000373019 ALS2Q96Q42 1657 aa10.41□□□□□ -0.74
SF3A3-201ENST00000373019 PALM3A6NDB9 673 aaPredicted RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 TMEM221A6NGB7 291 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 PALMO75781 387 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 GJB6O95452 261 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 GNA14O95837 355 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 GSTA2P09210 222 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 ITGA6P23229 1130 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 MCL1Q07820 350 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 MGAT5Q09328 741 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 AKNAD1Q5T1N1 836 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 MEI1Q5TIA1 1274 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 IGDCC4Q8TDY8 1250 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 FBF1Q8TES7 1133 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 SCFD2Q8WU76 684 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 SHISA4Q96DD7 197 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 ZNF333Q96JL9 665 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 IFT74Q96LB3 600 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 MBD4O95243 580 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 RASA1P20936 1047 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 MAGEA1P43355 309 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 IFI35P80217 286 aaPredicted RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 GFPT1Q06210 699 aaPredicted RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 Q4G0T1 1027 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 EXOC3L1Q86VI1 746 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 RNF10Q8N5U6 811 aaKnown RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 ZCRB1Q8TBF4 217 aaKnown RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 UBAC1Q9BSL1 405 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 TIPINQ9BVW5 301 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 PPP1R1BQ9UD71 204 aaPredicted RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 PIK3C2AO00443 1686 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 DAPK3O43293 454 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 SLC1A4P43007 532 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 DHX9Q08211 1270 aaKnown RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 ENOX2Q16206 610 aaKnown RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 CNPY1Q3B7I2 92 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 MIGA2Q7L4E1 593 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 RBBP8NLQ8NC74 664 aaPredicted RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 GATA6Q92908 595 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 RMDN2Q96LZ7 410 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 SELENOSQ9BQE4 189 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 RXFP1Q9HBX9 757 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 INTS9Q9NV88 658 aaKnown RBP10.4□□□□□ -0.74
SF3A3-201ENST00000373019 PRKAG3Q9UGI9 489 aa10.4□□□□□ -0.74
SF3A3-201ENST00000373019 ZBTB43O43298 467 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 UNC5CO95185 931 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 FAM200BP0CF97 657 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 IFNAR2P48551 515 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 USP46P62068 366 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 TIMM10P62072 90 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 TNNC1P63316 161 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 SSRP1Q08945 709 aaKnown RBP10.39□□□□□ -0.75
SF3A3-201ENST00000373019 ARMCX6Q7L4S7 300 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 FERMT2Q96AC1 680 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 HSFX1Q9UBD0 423 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 SCOCQ9UIL1 159 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 ZNF213O14771 459 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 RPN1P04843 607 aaKnown RBP10.39□□□□□ -0.75
SF3A3-201ENST00000373019 ZNF24P17028 368 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 PDE6CP51160 858 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 TBC1D10CQ8IV04 446 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 PGM2Q96G03 612 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 HAPLN3Q96S86 360 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 IQCGQ9H095 443 aaKnown RBP10.39□□□□□ -0.75
SF3A3-201ENST00000373019 NMRK1Q9NWW6 199 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 ABCF2Q9UG63 623 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 SLIT3O75094 1523 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 SLIT2O94813 1529 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 COL22A1Q8NFW1 1626 aaPredicted RBP10.39□□□□□ -0.75
SF3A3-201ENST00000373019 GTPBP6O43824 516 aaPredicted RBP10.39□□□□□ -0.75
SF3A3-201ENST00000373019 CACNA2D1P54289 1103 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 TTI2Q6NXR4 508 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 MPRIPQ6WCQ1 1025 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 BARGINQ6ZT62 677 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 FAM13CQ8NE31 585 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 ATP8B4Q8TF62 1192 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 SEC14L1Q92503 715 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 ERGIC2Q96RQ1 377 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 DUSP9Q99956 384 aaKnown RBP10.39□□□□□ -0.75
SF3A3-201ENST00000373019 DDX23Q9BUQ8 820 aaKnown RBP10.39□□□□□ -0.75
SF3A3-201ENST00000373019 PUS7LQ9H0K6 701 aaKnown RBP10.39□□□□□ -0.75
SF3A3-201ENST00000373019 LY9Q9HBG7 655 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 FGFR1OP2Q9NVK5 253 aa10.39□□□□□ -0.75
SF3A3-201ENST00000373019 COL14A1Q05707 1796 aaKnown RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 NEURL1BA8MQ27 555 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 AKR1B10O60218 316 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 AFPP02771 609 aaKnown RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 SKIV2L2P42285 1042 aaKnown RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 SERPINB4P48594 390 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 EHHADHQ08426 723 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 GCKRQ14397 625 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 ZNF530Q6P9A1 599 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 BICDL1Q6ZP65 573 aa10.38□□□□□ -0.75
SF3A3-201ENST00000373019 ZSCAN29Q8IWY8 852 aaPredicted RBP10.38□□□□□ -0.75
SF3A3-201ENST00000373019 NUDCD1Q96RS6 583 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms