RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 PIGBQ92521 554 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 LARP4BQ92615 738 aaKnown RBP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 TLCD1Q96CP7 247 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 CDK5RAP3Q96JB5 506 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 PBKQ96KB5 322 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 ZNF570Q96NI8 536 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 NLRP3Q96P20 1036 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 TSG101Q99816 390 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 PRMT1Q99873 361 aaKnown RBP10.55□□□□□ -0.72
LRRC40-201ENST00000370952 FGFBP2Q9BYJ0 223 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 SH3GLB2Q9NR46 395 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 SLC12A4Q9UP95 1085 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
LRRC40-201ENST00000370952 POTEMA6NI47 508 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 HGSO14964 777 aaPredicted RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 IFI35P80217 286 aaPredicted RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 GRIK3Q13003 919 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 SUSD4Q5VX71 490 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 ZNF571Q7Z3V5 609 aaPredicted RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 SPICE1Q8N0Z3 855 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 KIF2BQ8N4N8 673 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 DCP1AQ9NPI6 582 aaPredicted RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 ANKRD36CQ5JPF3 1778 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 ENO4A6NNW6 628 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 UBOX5O94941 541 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 UPP2O95045 317 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 NAPAP54920 295 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 IRX1P78414 480 aaPredicted RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 COBLL1Q53SF7 1204 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 TRPM8Q7Z2W7 1104 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 PEX26Q7Z412 305 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 DAAM2Q86T65 1068 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 DZIP3Q86Y13 1208 aaKnown RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 LRRC57Q8N9N7 239 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 EIF1ADQ8N9N8 165 aaKnown RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 ZNF483Q8TF39 744 aaPredicted RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 ATXN2LQ8WWM7 1075 aaKnown RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 DDX12PQ92771 950 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 SPAG5Q96R06 1193 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 UIMC1Q96RL1 719 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 CCDC113Q9H0I3 377 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 ADAM7Q9H2U9 754 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 AZI2Q9H6S1 392 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 CNOT10Q9H9A5 744 aaKnown RBP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 IL17RBQ9NRM6 502 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 BARHL2Q9NY43 387 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 MAD2L2Q9UI95 211 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 JAG2Q9Y219 1238 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.54□□□□□ -0.72
LRRC40-201ENST00000370952 ABCB11O95342 1321 aa10.54□□□□□ -0.72
LRRC40-201ENST00000370952 SLIT2O94813 1529 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 LRP5O75197 1615 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 BHMG1C9JSJ3 638 aaPredicted RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 SLCO1A2P46721 670 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 ALDH5A1P51649 535 aaPredicted RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 CACNB1Q02641 598 aaPredicted RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 PRPF4BQ13523 1007 aaKnown RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 NONOQ15233 471 aaKnown RBP eCLIP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 NKX1-1Q15270 411 aaPredicted RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 ZKSCAN8Q15776 578 aaPredicted RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 MAEAQ7L5Y9 396 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 ARMC2Q8NEN0 867 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 TBCKQ8TEA7 893 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 DYNLL2Q96FJ2 89 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 FMO2Q99518 471 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 NUCKS1Q9H1E3 243 aaKnown RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 VAT1LQ9HCJ6 419 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 TMEM260Q9NX78 707 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 SAMD15Q9P1V8 674 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 BIN2Q9UBW5 565 aaPredicted RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 SPDYE3A6NKU9 549 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 USP17L8P0C7I0 530 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 ZBTB48P10074 688 aaPredicted RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 PIGWQ7Z7B1 504 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 TAX1BP1Q86VP1 789 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 MYOCDQ8IZQ8 938 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 SYN2Q92777 582 aaPredicted RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 L3MBTL3Q96JM7 780 aaPredicted RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 CALR3Q96L12 384 aaKnown RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 SLC4A9Q96Q91 983 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 FAM167BQ9BTA0 163 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 INTS9Q9NV88 658 aaKnown RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 STK38LQ9Y2H1 464 aa10.53□□□□□ -0.72
LRRC40-201ENST00000370952 UTP11Q9Y3A2 253 aaKnown RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.53□□□□□ -0.72
LRRC40-201ENST00000370952 TAF1P21675 1872 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 PVALEFA0A1B0GWK0 134 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 FGGP02679 453 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 IL2RBP14784 551 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 EPS15P42566 896 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 INHBEP58166 350 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 SARNPP82979 210 aaKnown RBP10.52□□□□□ -0.72
LRRC40-201ENST00000370952 FKBP3Q00688 224 aaKnown RBP10.52□□□□□ -0.72
LRRC40-201ENST00000370952 CCDC38Q502W7 563 aa10.52□□□□□ -0.72
LRRC40-201ENST00000370952 ALKBH5Q6P6C2 394 aaKnown RBP10.52□□□□□ -0.72
LRRC40-201ENST00000370952 NEK8Q86SG6 692 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms