RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 RINT1Q6NUQ1 792 aa17.18■□□□□ 0.34
COL17A1-202ENST00000369733 ZC3H18Q86VM9 953 aaKnown RBP17.18■□□□□ 0.34
COL17A1-202ENST00000369733 FAM167BQ9BTA0 163 aa17.18■□□□□ 0.34
COL17A1-202ENST00000369733 CARD10Q9BWT7 1032 aa17.18■□□□□ 0.34
COL17A1-202ENST00000369733 ITIH6Q6UXX5 1313 aa17.18■□□□□ 0.34
COL17A1-202ENST00000369733 TTLL1O95922 423 aa17.18■□□□□ 0.34
COL17A1-202ENST00000369733 H2AFXP16104 143 aaPredicted RBP17.18■□□□□ 0.34
COL17A1-202ENST00000369733 FXR1P51114 621 aaKnown RBP eCLIP17.18■□□□□ 0.34
COL17A1-202ENST00000369733 RPS6KA2Q15349 733 aa17.18■□□□□ 0.34
COL17A1-202ENST00000369733 RNF207Q6ZRF8 634 aa17.18■□□□□ 0.34
COL17A1-202ENST00000369733 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.18■□□□□ 0.34
COL17A1-202ENST00000369733 ZBTB1Q9Y2K1 713 aa17.18■□□□□ 0.34
COL17A1-202ENST00000369733 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
COL17A1-202ENST00000369733 CDC42BPAQ5VT25 1732 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 PDE1BQ01064 536 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 TTLL11Q8NHH1 800 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 ASPHQ12797 758 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.17■□□□□ 0.34
COL17A1-202ENST00000369733 PDHA1P08559 390 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 CENPKQ9BS16 269 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 TRIM10Q9UDY6 481 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 ADD3Q9UEY8 706 aaKnown RBP17.17■□□□□ 0.34
COL17A1-202ENST00000369733 MIF4GDA9UHW6 222 aaKnown RBP17.17■□□□□ 0.34
COL17A1-202ENST00000369733 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 TRIM50Q86XT4 487 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 BRIP1Q9BX63 1249 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 MLXIPLQ9NP71 852 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 HAUS2Q9NVX0 235 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 ZFYVE16Q7Z3T8 1539 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 MAML1Q92585 1016 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 SPDL1Q96EA4 605 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 CCT8L2Q96SF2 557 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.17■□□□□ 0.34
COL17A1-202ENST00000369733 PARVGQ9HBI0 331 aa17.17■□□□□ 0.34
COL17A1-202ENST00000369733 NOC2LQ9Y3T9 749 aaKnown RBP17.17■□□□□ 0.34
COL17A1-202ENST00000369733 PVALEFA0A1B0GWK0 134 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 HNRNPDLO14979 420 aaKnown RBP17.16■□□□□ 0.34
COL17A1-202ENST00000369733 CORO7P57737 925 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 MMEL1Q495T6 779 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 SGMS1Q86VZ5 419 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ST13P4Q8IZP2 240 aaPredicted RBP17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ENAHQ8N8S7 591 aaPredicted RBP17.16■□□□□ 0.34
COL17A1-202ENST00000369733 SYT2Q8N9I0 419 aaPredicted RBP17.16■□□□□ 0.34
COL17A1-202ENST00000369733 HNRNPLLQ8WVV9 542 aaKnown RBP17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ABTB1Q969K4 478 aaPredicted RBP17.16■□□□□ 0.34
COL17A1-202ENST00000369733 TMEM206Q9H813 350 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 MRPL47Q9HD33 250 aaKnown RBP17.16■□□□□ 0.34
COL17A1-202ENST00000369733 RASA4BC9J798 803 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 RASA4O43374 803 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 TNNC2P02585 160 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 DYNLT1P63172 113 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ANKRD20A4Q4UJ75 823 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ANKRD20A8PQ5CZ79 823 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ANKRD20A2Q5SQ80 823 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ANKRD20A1Q5TYW2 823 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 CXorf56Q9H5V9 222 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 DNAJC12Q9UKB3 198 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 NLRP1Q9C000 1473 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 IL6STP40189 918 aaPredicted RBP17.16■□□□□ 0.34
COL17A1-202ENST00000369733 SCNN1DP51172 638 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 REXO1L1PQ8IX06 675 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ZNF577Q9BSK1 485 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 TMEM60Q9H2L4 133 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 SUGCTQ9HAC7 445 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 SEPT10Q9P0V9 454 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ZNF609O15014 1411 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 A0A0G2JND7 137 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 MXI1P50539 228 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 ARHGEF16Q5VV41 709 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 NACC1Q96RE7 527 aa17.16■□□□□ 0.34
COL17A1-202ENST00000369733 MROH7-TTC4A0A0A0MT08 1334 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 PP2D1A8MPX8 630 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 BASP1P80723 227 aaKnown RBP17.15■□□□□ 0.34
COL17A1-202ENST00000369733 ATP2C1P98194 919 aaPredicted RBP17.15■□□□□ 0.34
COL17A1-202ENST00000369733 TBC1D10BQ4KMP7 808 aaPredicted RBP17.15■□□□□ 0.34
COL17A1-202ENST00000369733 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 RAD54LQ92698 747 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 FUCA2Q9BTY2 467 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 PICK1Q9NRD5 415 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 NCAPD2Q15021 1401 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 GYG2O15488 501 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 AP5Z1O43299 807 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 PPFIA2O75334 1257 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 MECOMQ03112 1051 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 KCNH2Q12809 1159 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 CENPUQ71F23 418 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 EPM2AIP1Q7L775 607 aaPredicted RBP17.15■□□□□ 0.34
COL17A1-202ENST00000369733 SRRM1Q8IYB3 904 aaKnown RBP17.15■□□□□ 0.34
COL17A1-202ENST00000369733 CYTH2Q99418 400 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 SLITRK6Q9H5Y7 841 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 POTEMA6NI47 508 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 ALAS1P13196 640 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 SAT1P21673 171 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 UBXN2AP68543 259 aa17.15■□□□□ 0.34
COL17A1-202ENST00000369733 CAPRIN2Q6IMN6 1127 aaKnown RBP17.15■□□□□ 0.34
COL17A1-202ENST00000369733 PDXDC1Q6P996 788 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms