RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-204ENST00000368292 CASP8AP2Q9UKL3 1982 aa6.22□□□□□ -1.41
ECHDC1-204ENST00000368292 RPGRIP1LQ68CZ1 1315 aa6.22□□□□□ -1.41
ECHDC1-204ENST00000368292 WDR17Q8IZU2 1322 aa6.22□□□□□ -1.41
ECHDC1-204ENST00000368292 A0A087WZG4 1122 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 CCDC189A1A4V9 331 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 CFAP69A5D8W1 941 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 H0Y8X5 98 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 BIN1O00499 593 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 CDC45O75419 566 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 GCP02774 474 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 HPXP02790 462 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 GSNP06396 782 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 ITGA4P13612 1032 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 RPL10P27635 214 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 SSRP1Q08945 709 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 HDAC1Q13547 482 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 PLEKHG6Q3KR16 790 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 NOL9Q5SY16 702 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 HEATR6Q6AI08 1181 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 GET4Q7L5D6 327 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 CREBRFQ8IUR6 639 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 FIBCD1Q8N539 461 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 APPBP2Q92624 585 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 TRIM44Q96DX7 344 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 FGD4Q96M96 766 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 PRAM1Q96QH2 718 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 DSCC1Q9BVC3 393 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 G3BP2Q9UN86 482 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 DOT1LQ8TEK3 1739 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 UBR3Q6ZT12 1888 aa6.21□□□□□ -1.42
ECHDC1-204ENST00000368292 SLIT3O75094 1523 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 TIAM2Q8IVF5 1701 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 PPIP5K1Q6PFW1 1433 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 NOTOA8MTQ0 251 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 DHX16O60231 1041 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 ADCY3O60266 1144 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 FKTNO75072 461 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 FAM153BP0C7A2 387 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 AFMP43652 599 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 FXR1P51114 621 aaKnown RBP eCLIP6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 SOX10P56693 466 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 TBX4P57082 545 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 LMOD3Q0VAK6 560 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 TIGD5Q53EQ6 642 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 RTP2Q5QGT7 225 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 RNF187Q5TA31 235 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 KIAA0907Q7Z7F0 614 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 HOMER1Q86YM7 354 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 PDZD8Q8NEN9 1154 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 SPATA9Q9BWV2 254 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 SLC12A9Q9BXP2 914 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 IRF2BPLQ9H1B7 796 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 NOL6Q9H6R4 1146 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 RNF181Q9P0P0 153 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 WHRNQ9P202 907 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 NRBP1Q9UHY1 535 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 SH3BP1Q9Y3L3 701 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 COL4A3BPQ9Y5P4 624 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 PTCH2Q9Y6C5 1203 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 CUL9Q8IWT3 2517 aa6.2□□□□□ -1.42
ECHDC1-204ENST00000368292 KDM6AO15550 1401 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 A0A0G2JLW4 131 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 SSU72P8A0A1W2PR75 194 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 GOLGA6CA6NDK9 693 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 GOLGA6BA6NDN3 693 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 EFEMP2O95967 443 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 GOLGA6DP0CG33 693 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 VEGFAP15692 232 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 TRHRP34981 398 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 POU5F1Q01860 360 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 TKFCQ3LXA3 575 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 ICE2Q659A1 982 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 PCGF5Q86SE9 256 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 MSL3Q8N5Y2 521 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 ADCY4Q8NFM4 1077 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 FAM168AQ92567 244 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 ANP32BQ92688 251 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 MCMBPQ9BTE3 642 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 EPN3Q9H201 632 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 SPC25Q9HBM1 224 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 GOLGA6AQ9NYA3 693 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 APEX2Q9UBZ4 518 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 FEZ2Q9UHY8 353 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 DIS3Q9Y2L1 958 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 SZT2Q5T011 3432 aa6.19□□□□□ -1.42
ECHDC1-204ENST00000368292 POLR3AO14802 1390 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 A0A0C4DFX4 3053 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 ANKRD34BA5PLL1 514 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 S100BP04271 92 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 DUSP4Q13115 394 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 NR0B2Q15466 257 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 C16orf86Q6ZW13 317 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 ADAT2Q7Z6V5 191 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 ZSWIM9Q86XI8 627 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 ARHGEF39Q8N4T4 335 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 TMEM52Q8NDY8 209 aa6.18□□□□□ -1.42
ECHDC1-204ENST00000368292 MYLIPQ8WY64 445 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms