RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 RHOBTB3O94955 611 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 UQCRHP07919 91 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 CHRM1P11229 460 aaPredicted RBP13.46□□□□□ -0.25
USF1-203ENST00000368021 KCNK18Q7Z418 384 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 GPR142Q7Z601 462 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 FAM133AQ8N9E0 248 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 NEK9Q8TD19 979 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 ABHD8Q96I13 439 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
USF1-203ENST00000368021 POTEB2H3BUK9 544 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 KLRC4O43908 158 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 GNRH1P01148 92 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 EDNRBP24530 442 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.26
USF1-203ENST00000368021 MAPK4P31152 587 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.26
USF1-203ENST00000368021 MCM6Q14566 821 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 EPHA7Q15375 998 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 STXBP2Q15833 593 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 GNPTABQ3T906 1256 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 ZNF658Q5TYW1 1059 aaPredicted RBP13.46□□□□□ -0.26
USF1-203ENST00000368021 AOPEPQ8N6M6 819 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 SH3TC2Q8TF17 1288 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 CCDC47Q96A33 483 aaKnown RBP13.46□□□□□ -0.26
USF1-203ENST00000368021 PDLIM2Q96JY6 352 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 UNC45AQ9H3U1 944 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 DNM3Q9UQ16 869 aa13.46□□□□□ -0.26
USF1-203ENST00000368021 KIAA1217Q5T5P2 1943 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 LOC102724159A0A0B4J2E5 919 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 PVALEFA0A1B0GWK0 134 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 POTEFA5A3E0 1075 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 CCDC85CA6NKD9 419 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 B4DLN1 442 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 EIF3JO75822 258 aaKnown RBP13.45□□□□□ -0.26
USF1-203ENST00000368021 CYP2B6P20813 491 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 ALDH5A1P51649 535 aaPredicted RBP13.45□□□□□ -0.26
USF1-203ENST00000368021 MYL5Q02045 173 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 CNTN2Q02246 1040 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 PWP2Q15269 919 aaKnown RBP13.45□□□□□ -0.26
USF1-203ENST00000368021 SLC9C1Q4G0N8 1177 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 BCCIPQ9P287 314 aaKnown RBP eCLIP13.45□□□□□ -0.26
USF1-203ENST00000368021 ASTN1O14525 1302 aa13.45□□□□□ -0.26
USF1-203ENST00000368021 DNAJC25-GNG10A0A024R161 153 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 MYMKA6NI61 221 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 RGS20O76081 388 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 SLITRK3O94933 977 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 PLA2G4BP0C869 781 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 FCER1AP12319 257 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 ELNP15502 786 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 ICAM3P32942 547 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 ASIC1P78348 528 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 KCTD2Q14681 263 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 NCAPHQ15003 741 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 KMT5BQ4FZB7 885 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 PLEKHH3Q7Z736 793 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 MPHOSPH6Q99547 160 aaKnown RBP13.44□□□□□ -0.26
USF1-203ENST00000368021 TMEM51Q9NW97 253 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 GJD2Q9UKL4 321 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 IVNS1ABPQ9Y6Y0 642 aa13.44□□□□□ -0.26
USF1-203ENST00000368021 E9PMD0 336 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 CHMP2AO43633 222 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 SFNP31947 248 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 SLC12A3P55017 1021 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 TPM4P67936 248 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 KRT76Q01546 638 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 SARM1Q6SZW1 724 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 UNC13DQ70J99 1090 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 SYT2Q8N9I0 419 aaPredicted RBP13.43□□□□□ -0.26
USF1-203ENST00000368021 GIMAP8Q8ND71 665 aaPredicted RBP13.43□□□□□ -0.26
USF1-203ENST00000368021 RDM1Q8NG50 284 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 ENOX1Q8TC92 643 aaKnown RBP13.43□□□□□ -0.26
USF1-203ENST00000368021 DDX12PQ92771 950 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 MMP19Q99542 508 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 BMP2KQ9NSY1 1161 aaPredicted RBP13.43□□□□□ -0.26
USF1-203ENST00000368021 TCEAL9Q9UHQ7 104 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 DNAH12Q6ZR08 3092 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 NFASCO94856 1347 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 MGAMO43451 1857 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 LOXHD1Q8IVV2 1947 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 SOWAHBA6NEL2 793 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 SPATA31C2B4DYI2 1134 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 PPP1R3GB7ZBB8 358 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 ATP9AO75110 1047 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 EYA4O95677 639 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 P4HBP07237 508 aaKnown RBP13.43□□□□□ -0.26
USF1-203ENST00000368021 JAK3P52333 1124 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 CYP4A11Q02928 519 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 DHX8Q14562 1220 aaKnown RBP13.43□□□□□ -0.26
USF1-203ENST00000368021 COBLL1Q53SF7 1204 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 ZNF746Q6NUN9 644 aaPredicted RBP13.43□□□□□ -0.26
USF1-203ENST00000368021 MIER3Q7Z3K6 550 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 ABRAQ8N0Z2 381 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 DYDC2Q96IM9 177 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 SENP7Q9BQF6 1050 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 EXOC1Q9NV70 894 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 RGL1Q9NZL6 768 aa13.43□□□□□ -0.26
USF1-203ENST00000368021 ZNFX1Q9P2E3 1918 aaKnown RBP13.42□□□□□ -0.26
USF1-203ENST00000368021 STRNO43815 780 aa13.42□□□□□ -0.26
USF1-203ENST00000368021 ADCY3O60266 1144 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms