RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 ZNF252P-AS1Q0IIN9 211 aa10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 BAATQ14032 418 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 CCDC6Q16204 474 aa10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 TSSK4Q6SA08 328 aa10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 TMEFF1Q8IYR6 380 aa10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 C12orf76Q8N812 135 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 C12orf50Q8NA57 414 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 RIOK1Q9BRS2 568 aaKnown RBP10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 DZANK1Q9NVP4 752 aa10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-205ENST00000350435 HECTD1Q9ULT8 2610 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 B4DLN1 442 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 ARHGAP6O43182 974 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 STAG3L1P0CL83 205 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 NOVA1P51513 510 aaKnown RBP10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 MRPL12P52815 198 aaKnown RBP10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 NRLP54845 237 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 STARD6P59095 220 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 IKQ13123 557 aaPredicted RBP10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 PTPN14Q15678 1187 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 TMED8Q6PL24 325 aaPredicted RBP10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 NPAS4Q8IUM7 802 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 RPAP2Q8IXW5 612 aaPredicted RBP10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 AMOTL1Q8IY63 956 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 SLC44A3Q8N4M1 653 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 RSAD2Q8WXG1 361 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 DCP1AQ9NPI6 582 aaPredicted RBP10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 NYAP2Q9P242 653 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 LZTS1Q9Y250 596 aa10.68□□□□□ -0.7
UBE2D3-205ENST00000350435 SHROOM3Q8TF72 1996 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 PTPDC1A2A3K4 754 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 TMEM232C9JQI7 657 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 TREHO43280 583 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 GABBR2O75899 941 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 SEC24BO95487 1268 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 TOP3BO95985 862 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 GHRP10912 638 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 CLCN6P51797 869 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 STAT2P52630 851 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 LY6KQ17RY6 165 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 STPG1Q5TH74 334 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 KANK3Q6NY19 840 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 RASGRP2Q7LDG7 609 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 TMC7Q7Z402 723 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 ZNF605Q86T29 641 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 PROSER1Q86XN7 944 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 WWC1Q8IX03 1113 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 ZNF579Q8NAF0 562 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 CHURC1Q8WUH1 139 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 SDR42E1Q8WUS8 393 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 MRPS27Q92552 414 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 RAI2Q9Y5P3 530 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 KAT6AQ92794 2004 aa10.67□□□□□ -0.7
UBE2D3-205ENST00000350435 KANSL1LA0AUZ9 987 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 BMP3P12645 472 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 UBXN2BQ14CS0 331 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 CCDC62Q6P9F0 684 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 TMC5Q6UXY8 1006 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 C16orf86Q6ZW13 317 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 FAM160B2Q86V87 743 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 NXPE3Q969Y0 559 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 CLIP2Q9UDT6 1046 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 CCPG1Q9ULG6 757 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 LRFN2Q9ULH4 789 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 HDAC5Q9UQL6 1122 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 PIEZO2Q9H5I5 2752 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 FREM2Q5SZK8 3169 aa10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 TEP1Q99973 2627 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-205ENST00000350435 FRMPD2Q68DX3 1309 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 PRB1P04280 392 aa10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 EDNRBP24530 442 aa10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 CALML3P27482 149 aa10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 CA8P35219 290 aa10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 SIM2Q14190 667 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 SMC1AQ14683 1233 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 FAM26DQ5JW98 314 aa10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 COLGALT1Q8NBJ5 622 aa10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 OSBPL6Q9BZF3 934 aa10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 NEUROG3Q9Y4Z2 214 aa10.65□□□□□ -0.7
UBE2D3-205ENST00000350435 KALRNO60229 2985 aa10.65□□□□□ -0.71
UBE2D3-205ENST00000350435 ZNF462Q96JM2 2506 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 FAM170BA6NMN3 283 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 CLASP2O75122 1294 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 GBP2P32456 591 aaPredicted RBP10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 GATMP50440 423 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 PLCB3Q01970 1234 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 PPP2R5DQ14738 602 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 SF3A2Q15428 464 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 SEPT14Q6ZU15 432 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 TMEM87AQ8NBN3 555 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 DNERQ8NFT8 737 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 PPTC7Q8NI37 304 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 KLHL5Q96PQ7 755 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 PRMT8Q9NR22 394 aaPredicted RBP10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 MYH15Q9Y2K3 1946 aa10.64□□□□□ -0.71
UBE2D3-205ENST00000350435 LAMA1P25391 3075 aa10.63□□□□□ -0.71
UBE2D3-205ENST00000350435 GIPC1O14908 333 aa10.63□□□□□ -0.71
UBE2D3-205ENST00000350435 GNAT1P11488 350 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms