RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 DHX8Q14562 1220 aaKnown RBP16.4■□□□□ 0.22
CXCL12-201ENST00000343575 CCDC62Q6P9F0 684 aa16.4■□□□□ 0.22
CXCL12-201ENST00000343575 TPH2Q8IWU9 490 aa16.4■□□□□ 0.22
CXCL12-201ENST00000343575 BANK1Q8NDB2 785 aa16.4■□□□□ 0.22
CXCL12-201ENST00000343575 SMARCE1Q969G3 411 aa16.4■□□□□ 0.22
CXCL12-201ENST00000343575 C7orf25Q9BPX7 421 aa16.4■□□□□ 0.22
CXCL12-201ENST00000343575 DIS3Q9Y2L1 958 aaKnown RBP16.4■□□□□ 0.22
CXCL12-201ENST00000343575 STK24Q9Y6E0 443 aa16.4■□□□□ 0.22
CXCL12-201ENST00000343575 SORBS3O60504 671 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 VEGFBP49765 207 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 SLC12A3P55017 1021 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 NLRP12P59046 1061 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 KRT76Q01546 638 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 STX1AQ16623 288 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 UGCGQ16739 394 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 LY6KQ17RY6 165 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 ZNF746Q6NUN9 644 aaPredicted RBP16.39■□□□□ 0.22
CXCL12-201ENST00000343575 TAPT1Q6NXT6 567 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 SV2BQ7L1I2 683 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 DPP9Q86TI2 863 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 GSDMAQ96QA5 445 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 LXNQ9BS40 222 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 DDX41Q9UJV9 622 aaKnown RBP16.39■□□□□ 0.22
CXCL12-201ENST00000343575 ZSWIM8A7E2V4 1837 aa16.39■□□□□ 0.22
CXCL12-201ENST00000343575 WDR81Q562E7 1941 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 B4DLN1 442 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 ALDH1A1P00352 501 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 IGHA2P01877 340 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 PLA2G4BP0C869 781 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 TGFB3P10600 412 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 MAP2K5Q13163 448 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 CYFIP1Q7L576 1253 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 PIGOQ8TEQ8 1089 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 ARHGAP39Q9C0H5 1083 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 JPH1Q9HDC5 661 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-201ENST00000343575 SLC9A2Q9UBY0 812 aa16.39■□□□□ 0.21
CXCL12-201ENST00000343575 CTIFO43310 598 aaKnown RBP16.38■□□□□ 0.21
CXCL12-201ENST00000343575 FARP2O94887 1054 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-201ENST00000343575 ATG7O95352 703 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 MYL1P05976 194 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 P4HBP07237 508 aaKnown RBP16.38■□□□□ 0.21
CXCL12-201ENST00000343575 HOXC6P09630 235 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 MUTP22033 750 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 PTGS1P23219 599 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 ARSHQ5FYA8 562 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 CNNM4Q6P4Q7 775 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 ABHD15Q6UXT9 468 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 PDCL2Q8N4E4 241 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 ANKRD7Q92527 254 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 DNAJC19Q96DA6 116 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 CCDC34Q96HJ3 373 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 ANO10Q9NW15 660 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 FLRT1Q9NZU1 646 aa16.38■□□□□ 0.21
CXCL12-201ENST00000343575 WDR64B1ANS9 1081 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 TBC1D8O95759 1140 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 RPN1P04843 607 aaKnown RBP16.37■□□□□ 0.21
CXCL12-201ENST00000343575 CYP11B2P19099 503 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 SFNP31947 248 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 JAK3P52333 1124 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 ACTR2P61160 394 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 KCTD17Q8N5Z5 321 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 SYT2Q8N9I0 419 aaPredicted RBP16.37■□□□□ 0.21
CXCL12-201ENST00000343575 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
CXCL12-201ENST00000343575 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.37■□□□□ 0.21
CXCL12-201ENST00000343575 DNM3Q9UQ16 869 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 SAMM50Q9Y512 469 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 PCDHA10Q9Y5I2 948 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 SYNGAP1Q96PV0 1343 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 MGAMO43451 1857 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 SMC2O95347 1197 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 LYPLA2O95372 231 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 EYA4O95677 639 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 SP4Q02446 784 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 IQCB1Q15051 598 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 REM2Q8IYK8 340 aaPredicted RBP16.37■□□□□ 0.21
CXCL12-201ENST00000343575 TRIML1Q8N9V2 468 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 RDM1Q8NG50 284 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 NEK9Q8TD19 979 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 DDX12PQ92771 950 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 COPS5Q92905 334 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 TINF2Q9BSI4 451 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 BHMT2Q9H2M3 363 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 CBX8Q9HC52 389 aa16.37■□□□□ 0.21
CXCL12-201ENST00000343575 RBM47A0AV96 593 aaKnown RBP16.36■□□□□ 0.21
CXCL12-201ENST00000343575 ZNF862O60290 1169 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 STBD1O95210 358 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 CD44P16070 742 aaKnown RBP16.36■□□□□ 0.21
CXCL12-201ENST00000343575 MAP2K2P36507 400 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 QARSP47897 775 aaKnown RBP16.36■□□□□ 0.21
CXCL12-201ENST00000343575 ZNF165P49910 485 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 CCL14Q16627 93 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 KMT5BQ4FZB7 885 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 TAF3Q5VWG9 929 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 DYMQ7RTS9 669 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 SMYD4Q8IYR2 804 aaPredicted RBP16.36■□□□□ 0.21
CXCL12-201ENST00000343575 FAM200AQ8TCP9 573 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 MED15Q96RN5 788 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 CFHR5Q9BXR6 569 aa16.36■□□□□ 0.21
CXCL12-201ENST00000343575 ZSWIM4Q9H7M6 989 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms