RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PNMA5Q96PV4 448 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 RUFY1Q96T51 708 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 C7orf25Q9BPX7 421 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 RAB34Q9BZG1 259 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 A1CFQ9NQ94 594 aaKnown RBP20.66■□□□□ 0.9
PSPC1-201ENST00000338910 KLK7P49862 253 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 MRPS25P82663 173 aaKnown RBP20.65■□□□□ 0.9
PSPC1-201ENST00000338910 AMPD3Q01432 767 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 STK4Q13043 487 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 PDIA5Q14554 519 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 TTI2Q6NXR4 508 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 GMCL1P1Q8NEA9 526 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 EEF2KMTQ96G04 330 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 TRIM47Q96LD4 638 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 TUBGCP2Q9BSJ2 902 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 PAGR1Q9BTK6 254 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 BLOC1S4Q9NUP1 217 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 MAGEC2Q9UBF1 373 aaPredicted RBP20.65■□□□□ 0.9
PSPC1-201ENST00000338910 MYO1FO00160 1098 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 TACC1O75410 805 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 FCER1AP12319 257 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 TAL1P17542 331 aaPredicted RBP20.65■□□□□ 0.9
PSPC1-201ENST00000338910 SV2BQ7L1I2 683 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 MIGA2Q7L4E1 593 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 OTUD6BQ8N6M0 293 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 MTMR14Q8NCE2 650 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 SNX29Q8TEQ0 813 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 HPS3Q969F9 1004 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 ZIM3Q96PE6 472 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 OSBPL9Q96SU4 736 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 SH2D4AQ9H788 454 aa20.65■□□□□ 0.9
PSPC1-201ENST00000338910 FER1L6Q2WGJ9 1857 aa20.64■□□□□ 0.9
PSPC1-201ENST00000338910 PSMA7O14818 248 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 KIAA0754O94854 1291 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 BMP3P12645 472 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 ECE1P42892 770 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 KRT79Q5XKE5 535 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 KRT26Q7Z3Y9 468 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 SH2D3CQ8N5H7 860 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 GMCL1Q96IK5 515 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 AMNQ9BXJ7 453 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 NNTQ13423 1086 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 CCDC47Q96A33 483 aaKnown RBP20.64■□□□□ 0.89
PSPC1-201ENST00000338910 MYOZ2Q9NPC6 264 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 PCDHA12Q9UN75 941 aa20.64■□□□□ 0.89
PSPC1-201ENST00000338910 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.89
PSPC1-201ENST00000338910 MYH10P35580 1976 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 MEIS2O14770 477 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 TCP1P17987 556 aaKnown RBP20.63■□□□□ 0.89
PSPC1-201ENST00000338910 PSEN1P49768 467 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 TBC1D8BQ0IIM8 1120 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 SPA17Q15506 151 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 SYDE2Q5VT97 1194 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 DYMQ7RTS9 669 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 YTHDF3Q7Z739 585 aaKnown RBP20.63■□□□□ 0.89
PSPC1-201ENST00000338910 NOC3LQ8WTT2 800 aaKnown RBP20.63■□□□□ 0.89
PSPC1-201ENST00000338910 MATR3P43243 847 aaKnown RBP eCLIP20.63■□□□□ 0.89
PSPC1-201ENST00000338910 FIGNQ5HY92 759 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 EMC10Q5UCC4 262 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 FKBP1CQ5VVH2 108 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 NFRKBQ6P4R8 1299 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 KDM7AQ6ZMT4 941 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 RPAINQ86UA6 219 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 FBXO11Q86XK2 927 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 LARP4BQ92615 738 aaKnown RBP20.63■□□□□ 0.89
PSPC1-201ENST00000338910 CCDC42Q96M95 316 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 DUSP9Q99956 384 aaKnown RBP20.63■□□□□ 0.89
PSPC1-201ENST00000338910 SGIP1Q9BQI5 828 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 ANO3Q9BYT9 981 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 GLT8D2Q9H1C3 349 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 MLXIPQ9HAP2 919 aa20.63■□□□□ 0.89
PSPC1-201ENST00000338910 A0A1W2PQJ5 194 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 MYMKA6NI61 221 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 USO1O60763 962 aaKnown RBP20.62■□□□□ 0.89
PSPC1-201ENST00000338910 EGFRP00533 1210 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 KRT14P02533 472 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 LSP1P33241 339 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 ATP1A2P50993 1020 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 ECM1Q16610 540 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 KCNK18Q7Z418 384 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 ACER1Q8TDN7 264 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 ZBED3Q96IU2 234 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-201ENST00000338910 P2RX7Q99572 595 aaKnown RBP20.62■□□□□ 0.89
PSPC1-201ENST00000338910 SMARCAL1Q9NZC9 954 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-201ENST00000338910 HYOU1Q9Y4L1 999 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 H0YHG0 523 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 PLEKP08567 350 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-201ENST00000338910 GCFC2P16383 781 aaKnown RBP20.62■□□□□ 0.89
PSPC1-201ENST00000338910 NAP1L1P55209 391 aaKnown RBP20.62■□□□□ 0.89
PSPC1-201ENST00000338910 NAA35Q5VZE5 725 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 KCTD16Q68DU8 428 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 IQCKQ8N0W5 287 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 RNPC3Q96LT9 517 aaKnown RBP20.62■□□□□ 0.89
PSPC1-201ENST00000338910 IFIH1Q9BYX4 1025 aaKnown RBP20.62■□□□□ 0.89
PSPC1-201ENST00000338910 EPN3Q9H201 632 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 SLC39A2Q9NP94 309 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 STK17AQ9UEE5 414 aa20.62■□□□□ 0.89
PSPC1-201ENST00000338910 MOCS3O95396 460 aa20.61■□□□□ 0.89
PSPC1-201ENST00000338910 SETQ01105 290 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms