RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ADALQ6DHV7 355 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 EEPD1Q7L9B9 569 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 TBC1D1Q86TI0 1168 aaPredicted RBP17.61■□□□□ 0.41
PTCH1-201ENST00000331920 LRRC8AQ8IWT6 810 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 FTOQ9C0B1 505 aaKnown RBP eCLIP17.61■□□□□ 0.41
PTCH1-201ENST00000331920 GFPT2O94808 682 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 WASHC5Q12768 1159 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 FBXO31Q5XUX0 539 aaPredicted RBP17.6■□□□□ 0.41
PTCH1-201ENST00000331920 HIBCHQ6NVY1 386 aaPredicted RBP17.6■□□□□ 0.41
PTCH1-201ENST00000331920 ICA1LQ8NDH6 482 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 OTUB1Q96FW1 271 aaPredicted RBP17.6■□□□□ 0.41
PTCH1-201ENST00000331920 FTCDO95954 541 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 ARL13BQ3SXY8 428 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 ADCK1Q86TW2 530 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 ATP8A2Q9NTI2 1148 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 SEL1LQ9UBV2 794 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 DHX9Q08211 1270 aaKnown RBP17.6■□□□□ 0.41
PTCH1-201ENST00000331920 SYT2Q8N9I0 419 aaPredicted RBP17.6■□□□□ 0.41
PTCH1-201ENST00000331920 NEK8Q86SG6 692 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 ASCC2Q9H1I8 757 aaPredicted RBP17.6■□□□□ 0.41
PTCH1-201ENST00000331920 DOK7Q18PE1 504 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 DPY19L2Q6NUT2 758 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 SDR42E1Q8WUS8 393 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 CLIC6Q96NY7 704 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 GCNT4Q9P109 453 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 NOVA2Q9UNW9 492 aaKnown RBP17.6■□□□□ 0.41
PTCH1-201ENST00000331920 PDE8AO60658 829 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 KRT72Q14CN4 511 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 MCF2L2Q86YR7 1114 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 SLC35F6Q8N357 371 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 CYP4F11Q9HBI6 524 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 POLR3EQ9NVU0 708 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 FANCLQ9NW38 375 aa17.6■□□□□ 0.41
PTCH1-201ENST00000331920 RASSF10A6NK89 507 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 TOM1O60784 492 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 PSMD2Q13200 908 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 CEP55Q53EZ4 464 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 NDFIP2Q9NV92 336 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 CACNB1Q02641 598 aaPredicted RBP17.59■□□□□ 0.41
PTCH1-201ENST00000331920 MYO1EQ12965 1108 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 LRRC8EQ6NSJ5 796 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 ELMOD1Q8N336 334 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 DBNDD2Q9BQY9 259 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 ZNF577Q9BSK1 485 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 DMAP1Q9NPF5 467 aaPredicted RBP17.59■□□□□ 0.41
PTCH1-201ENST00000331920 AOC3Q16853 763 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 ARHGAP18Q8N392 663 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 RGL1Q9NZL6 768 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 CIITAP33076 1130 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 MFSD14BQ5SR56 506 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 DDIASQ8IXT1 998 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 FAM133AQ8N9E0 248 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 ANKRD49Q8WVL7 239 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 SH3GL3Q99963 347 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 STMN3Q9NZ72 180 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 APOBEC2Q9Y235 224 aaKnown RBP17.59■□□□□ 0.41
PTCH1-201ENST00000331920 OR52Z1P0C646 297 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 FGD2Q7Z6J4 655 aa17.59■□□□□ 0.41
PTCH1-201ENST00000331920 CA4P22748 312 aa17.58■□□□□ 0.41
PTCH1-201ENST00000331920 BPIFB4P59827 614 aa17.58■□□□□ 0.41
PTCH1-201ENST00000331920 AFG1LQ8WV93 481 aa17.58■□□□□ 0.41
PTCH1-201ENST00000331920 CACNA2D2Q9NY47 1150 aa17.58■□□□□ 0.41
PTCH1-201ENST00000331920 MAP3K10Q02779 954 aa17.58■□□□□ 0.41
PTCH1-201ENST00000331920 MDM2Q00987 491 aaPredicted RBP17.58■□□□□ 0.41
PTCH1-201ENST00000331920 TNNQ9UQP3 1299 aa17.58■□□□□ 0.41
PTCH1-201ENST00000331920 TRIM37O94972 964 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 SEC24BO95487 1268 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 KRT75O95678 551 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 PPARAQ07869 468 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 MIS18BP1Q6P0N0 1132 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 KIAA1468Q9P260 1216 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 AURKCQ9UQB9 309 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 ZAP70P43403 619 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 NUGGCQ68CJ6 796 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
PTCH1-201ENST00000331920 ELAC2Q9BQ52 826 aaKnown RBP17.58■□□□□ 0.4
PTCH1-201ENST00000331920 TRIM33Q9UPN9 1127 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 NFKBIAP25963 317 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 KIAA1755Q5JYT7 1200 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 DSTYKQ6XUX3 929 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 ARHGEF3Q9NR81 526 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 IL16Q14005 1332 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 SCG2P13521 617 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 NR2F2P24468 414 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 C8orf34Q49A92 452 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 FMO2Q99518 471 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 ZMYND12Q9H0C1 365 aa17.58■□□□□ 0.4
PTCH1-201ENST00000331920 PABPC4Q13310 644 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 NNTQ13423 1086 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 PPP6R3Q5H9R7 873 aaPredicted RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 ZNF215Q9UL58 517 aaPredicted RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 E7EWF7 191 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 COPS2P61201 443 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 KRT77Q7Z794 578 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 SMYD4Q8IYR2 804 aaPredicted RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 ZSCAN10Q96SZ4 725 aaPredicted RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 KLHL8Q9P2G9 620 aaPredicted RBP17.57■□□□□ 0.4
PTCH1-201ENST00000331920 SPDYE5A6NIY4 337 aa17.57■□□□□ 0.4
PTCH1-201ENST00000331920 PAPOLAP51003 745 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms