RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 MKS1Q9NXB0 559 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 FBXO9Q9UK97 447 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 UNCXA6NJT0 531 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 GYPCP04921 128 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 TAF11Q15544 211 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 PACS1Q6VY07 963 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 EXOC3L1Q86VI1 746 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 LCA5Q86VQ0 697 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 CRAMP1Q96RY5 1269 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 ZSWIM5Q9P217 1185 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 RFX7Q2KHR2 1363 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 STXBP3O00186 592 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 HGSO14964 777 aaPredicted RBP11.24□□□□□ -0.61
SF3B2-201ENST00000322535 NMT2O60551 498 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 PFDN1O60925 122 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 HOXD12P35452 270 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 CACNB3P54284 484 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 OXCT1P55809 520 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 DYNC1I2Q13409 638 aaKnown RBP11.24□□□□□ -0.61
SF3B2-201ENST00000322535 KRT32Q14532 448 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 TCERG1LQ5VWI1 586 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 ERICH1Q86X53 443 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 MAPKAPK5Q8IW41 473 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 SLC43A3Q8NBI5 491 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 TGFBRAP1Q8WUH2 860 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 NFU1Q9UMS0 254 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 SCAF8Q9UPN6 1271 aaKnown RBP11.24□□□□□ -0.61
SF3B2-201ENST00000322535 CTDP1Q9Y5B0 961 aaPredicted RBP11.24□□□□□ -0.61
SF3B2-201ENST00000322535 ANKRD31Q8N7Z5 1873 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 MYH7P12883 1935 aa11.24□□□□□ -0.61
SF3B2-201ENST00000322535 FAM153BP0C7A2 387 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 ATP2B4P23634 1241 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 KIF5BP33176 963 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 USP46P62068 366 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
SF3B2-201ENST00000322535 TMED1Q13445 227 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 PICALMQ13492 652 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 FAM153CQ494X1 144 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 FAM47AQ5JRC9 791 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 ALS2CLQ60I27 953 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 SHC4Q6S5L8 630 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 MICU3Q86XE3 530 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 TRIM50Q86XT4 487 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 GPIHBP1Q8IV16 184 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 NCOA7Q8NI08 942 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 DYDC1Q8WWB3 177 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 DYNLL2Q96FJ2 89 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 SLC7A5P2Q9GIP4 190 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 VPS16Q9H269 839 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 INIPQ9NRY2 104 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 FAM153AQ9UHL3 310 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 PAIP2BQ9ULR5 123 aaKnown RBP11.23□□□□□ -0.61
SF3B2-201ENST00000322535 DUSP10Q9Y6W6 482 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 BAZ2AQ9UIF9 1905 aaKnown RBP11.23□□□□□ -0.61
SF3B2-201ENST00000322535 KLF18A0A0U1RQI7 1052 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 KLRG2A4D1S0 409 aaPredicted RBP11.23□□□□□ -0.61
SF3B2-201ENST00000322535 ZSCAN5CA6NGD5 496 aaPredicted RBP11.23□□□□□ -0.61
SF3B2-201ENST00000322535 A8MUI8 341 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 KIF28PB7ZC32 967 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 RANBP6O60518 1105 aaKnown RBP11.23□□□□□ -0.61
SF3B2-201ENST00000322535 NPTXRO95502 500 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 HARSP12081 509 aaKnown RBP11.23□□□□□ -0.61
SF3B2-201ENST00000322535 LMNB1P20700 586 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 KRT9P35527 623 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 EXOSC10Q01780 885 aaKnown RBP11.23□□□□□ -0.61
SF3B2-201ENST00000322535 SLMAPQ14BN4 828 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 P3H1Q32P28 736 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 CNGA4Q8IV77 575 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 CERS5Q8N5B7 392 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 SLC44A5Q8NCS7 719 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 OR2W6PQ8NHA6 318 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 MCM9Q9NXL9 1143 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 MAN1B1Q9UKM7 699 aa11.23□□□□□ -0.61
SF3B2-201ENST00000322535 BAZ2BQ9UIF8 2168 aaKnown RBP11.23□□□□□ -0.61
SF3B2-201ENST00000322535 YEATS4O95619 227 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 DPEP1P16444 411 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 EPHB4P54760 987 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 ANO7Q6IWH7 933 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 SEPT14Q6ZU15 432 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 TMTC1Q8IUR5 882 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 SMYD4Q8IYR2 804 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 PCDH18Q9HCL0 1135 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 ZNHIT6Q9NWK9 470 aaKnown RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 CHD4Q14839 1912 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 SCG2P13521 617 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 ZNF18P17022 549 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 PCK1P35558 622 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 FXNQ16595 210 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 GKAP1Q5VSY0 366 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 FAAH2Q6GMR7 532 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 CRELD2Q6UXH1 353 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 CYP26C1Q6V0L0 522 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 MFSD6Q6ZSS7 791 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 MB21D2Q8IYB1 491 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-201ENST00000322535 TMCO5AQ8N6Q1 288 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 KCNH3Q9ULD8 1083 aa11.22□□□□□ -0.61
SF3B2-201ENST00000322535 EFR3BQ9Y2G0 817 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms