RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 SFR1Q86XK3 245 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 MTMR14Q8NCE2 650 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 MSANTD4Q8NCY6 345 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 HDAC6Q9UBN7 1215 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 RABGAP1Q9Y3P9 1069 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 PCDHA13Q9Y5I0 950 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 DUSP10Q9Y6W6 482 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 ERLIN1O75477 346 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 LCA5LO95447 670 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 EYA4O95677 639 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 NR2F2P24468 414 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 ZYXQ15942 572 aaKnown RBP17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 KNOP1Q1ED39 458 aaKnown RBP17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 MIGA2Q7L4E1 593 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 EPM2AIP1Q7L775 607 aaPredicted RBP17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 TRIM58Q8NG06 486 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 BHMT2Q9H2M3 363 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 RGL1Q9NZL6 768 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 SSU72P8A0A1W2PR75 194 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 MAP2K7O14733 419 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 PLA2G6O60733 806 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 NOL4O94818 638 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 CAP2P40123 477 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 CKAP4Q07065 602 aaKnown RBP17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 FAM83AQ86UY5 434 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 HNRNPLLQ8WVV9 542 aaKnown RBP17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 SYN2Q92777 582 aaPredicted RBP17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 RUSC1Q9BVN2 902 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 RAB21Q9UL25 225 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 TRAF3IP3Q9Y228 551 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 CALUO43852 315 aaPredicted RBP17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 TACC1O75410 805 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 SLC9C1Q4G0N8 1177 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 LRCH2Q5VUJ6 765 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 OTOP1Q7RTM1 612 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 AGBL3Q8NEM8 1001 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 RPGRIP1Q96KN7 1286 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 LSM14BQ9BX40 385 aaKnown RBP17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 TMEM51Q9NW97 253 aa17.23■□□□□ 0.35
TSC22D3-201ENST00000315660 RSPH10B2B2RC85 870 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 PSMD10O75832 226 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 RSPH10BP0C881 870 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 HOXD13P35453 343 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 TDRD12Q587J7 1177 aaKnown RBP17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 SFMBT2Q5VUG0 894 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 GPIHBP1Q8IV16 184 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 SLC5A5Q92911 643 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 EXOC4Q96A65 974 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 PNKPQ96T60 521 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 HSD17B14Q9BPX1 270 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 GLIS2Q9BZE0 524 aaPredicted RBP17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 GBP3Q9H0R5 595 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 TUFT1Q9NNX1 390 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 NLRC4Q9NPP4 1024 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 FEM1BQ9UK73 627 aa17.22■□□□□ 0.35
TSC22D3-201ENST00000315660 H3BQF6 201 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 PDXKO00764 312 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 RHOXF2BP0C7M4 288 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 MYBP10242 640 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 UBXN2AP68543 259 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 ASTE1Q2TB18 679 aaPredicted RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 HGSNATQ68CP4 663 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 SLC30A10Q6XR72 485 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 FRMD5Q7Z6J6 570 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 NOA1Q8NC60 698 aaKnown RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 ALS2CR12Q96Q35 445 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 RHOXF2Q9BQY4 288 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 LUC7LQ9NQ29 371 aaKnown RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 JADE2Q9NQC1 790 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 FBXO28Q9NVF7 368 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 PGAP2Q9UHJ9 254 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 JRKLQ9Y4A0 524 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 PRPF6O94906 941 aaKnown RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 GAP43P17677 238 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 RPL13P26373 211 aaKnown RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 MAGEA1P43355 309 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 POLR2FP61218 127 aaKnown RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 PPP2R5CQ13362 524 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 CTTNQ14247 550 aaKnown RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 ZBED3Q96IU2 234 aaPredicted RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 CRACR2AQ9BSW2 395 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 TSPYL1Q9H0U9 437 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 PSD3Q9NYI0 1048 aa17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 ARMCX3Q9UH62 379 aaPredicted RBP17.21■□□□□ 0.35
TSC22D3-201ENST00000315660 GAS7O60861 476 aa17.2■□□□□ 0.34
TSC22D3-201ENST00000315660 SLITRK3O94933 977 aa17.2■□□□□ 0.34
TSC22D3-201ENST00000315660 SERPING1P05155 500 aa17.2■□□□□ 0.34
TSC22D3-201ENST00000315660 ASNSP08243 561 aa17.2■□□□□ 0.34
TSC22D3-201ENST00000315660 KCNH2Q12809 1159 aa17.2■□□□□ 0.34
TSC22D3-201ENST00000315660 CEP55Q53EZ4 464 aa17.2■□□□□ 0.34
TSC22D3-201ENST00000315660 BEND6Q5SZJ8 279 aaPredicted RBP17.2■□□□□ 0.34
TSC22D3-201ENST00000315660 RINT1Q6NUQ1 792 aa17.2■□□□□ 0.34
TSC22D3-201ENST00000315660 HDXQ7Z353 690 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms