RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 NEDD9Q14511 834 aa25.1■■□□□ 1.61
IRF3-201ENST00000309877 C17orf99Q6UX52 265 aa25.1■■□□□ 1.61
IRF3-201ENST00000309877 CYFIP1Q7L576 1253 aa25.1■■□□□ 1.61
IRF3-201ENST00000309877 BCAS3Q9H6U6 928 aa25.1■■□□□ 1.61
IRF3-201ENST00000309877 SLC15A5A6NIM6 579 aa25.09■■□□□ 1.61
IRF3-201ENST00000309877 YY1P25490 414 aa25.09■■□□□ 1.61
IRF3-201ENST00000309877 STIM1Q13586 685 aa25.09■■□□□ 1.61
IRF3-201ENST00000309877 ARMCX2Q7L311 632 aa25.09■■□□□ 1.61
IRF3-201ENST00000309877 CCDC65Q8IXS2 484 aa25.09■■□□□ 1.61
IRF3-201ENST00000309877 ZIC5Q96T25 663 aa25.09■■□□□ 1.61
IRF3-201ENST00000309877 PANK4Q9NVE7 773 aa25.09■■□□□ 1.61
IRF3-201ENST00000309877 NPHP3-ACAD11A0A0J9YXS1 232 aa25.08■■□□□ 1.61
IRF3-201ENST00000309877 ZBTB39O15060 712 aa25.08■■□□□ 1.61
IRF3-201ENST00000309877 LYPLA2O95372 231 aa25.08■■□□□ 1.61
IRF3-201ENST00000309877 UBA1P22314 1058 aaKnown RBP25.08■■□□□ 1.61
IRF3-201ENST00000309877 ACTR2P61160 394 aa25.08■■□□□ 1.61
IRF3-201ENST00000309877 NCAPHQ15003 741 aa25.08■■□□□ 1.61
IRF3-201ENST00000309877 ARSHQ5FYA8 562 aa25.08■■□□□ 1.61
IRF3-201ENST00000309877 MIS18BP1Q6P0N0 1132 aa25.08■■□□□ 1.61
IRF3-201ENST00000309877 ZNF467Q7Z7K2 595 aaPredicted RBP25.08■■□□□ 1.61
IRF3-201ENST00000309877 ENOX1Q8TC92 643 aaKnown RBP25.08■■□□□ 1.61
IRF3-201ENST00000309877 SLC5A4Q9NY91 659 aa25.08■■□□□ 1.61
IRF3-201ENST00000309877 PLXNB2O15031 1838 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 ARHGEF35A5YM69 484 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 PRCPP42785 496 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 RAD51AP2Q09MP3 1159 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 PSMD2Q13200 908 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 FBXO16Q8IX29 292 aaPredicted RBP25.07■■□□□ 1.6
IRF3-201ENST00000309877 C4orf19Q8IY42 314 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 DIS3Q9Y2L1 958 aaKnown RBP25.07■■□□□ 1.6
IRF3-201ENST00000309877 KIAA1217Q5T5P2 1943 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 DKC1O60832 514 aaKnown RBP eCLIP25.07■■□□□ 1.69e-9■■■□□ 15.7
IRF3-201ENST00000309877 ECM2O94769 699 aaPredicted RBP25.07■■□□□ 1.6
IRF3-201ENST00000309877 CCDC173Q0VFZ6 552 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 NOGQ13253 232 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 CRHR2Q13324 411 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 DEFB115Q30KQ5 88 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 ATP6V0A1Q93050 837 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 RUSC1Q9BVN2 902 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 GABBR1Q9UBS5 961 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 CTNND2Q9UQB3 1225 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 MAPK8IP1Q9UQF2 711 aa25.07■■□□□ 1.6
IRF3-201ENST00000309877 ZNFX1Q9P2E3 1918 aaKnown RBP25.06■■□□□ 1.6
IRF3-201ENST00000309877 PPP1R2P41236 205 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 STK4Q13043 487 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 COASYQ13057 564 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 GIT2Q14161 759 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 UGCGQ16739 394 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 LY6KQ17RY6 165 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 RINT1Q6NUQ1 792 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 ABHD15Q6UXT9 468 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 TRMT44Q8IYL2 757 aaKnown RBP25.06■■□□□ 1.6
IRF3-201ENST00000309877 ADSSL1Q8N142 457 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 ZNF784Q8NCA9 323 aaPredicted RBP25.06■■□□□ 1.6
IRF3-201ENST00000309877 SLC39A2Q9NP94 309 aa25.06■■□□□ 1.6
IRF3-201ENST00000309877 DDX41Q9UJV9 622 aaKnown RBP25.06■■□□□ 1.6
IRF3-201ENST00000309877 CA12O43570 354 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 ADCY5O95622 1261 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 ALDH1A1P00352 501 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 STX17P56962 302 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 CACNB1Q02641 598 aaPredicted RBP25.05■■□□□ 1.6
IRF3-201ENST00000309877 PAK1Q13153 545 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 SWSAP1Q6NVH7 229 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 NELFBQ8WX92 580 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 CCDC43Q96MW1 224 aaKnown RBP25.05■■□□□ 1.6
IRF3-201ENST00000309877 ZHX3Q9H4I2 956 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 MLXIPQ9HAP2 919 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 CREBZFQ9NS37 354 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 RWDD2AQ9UIY3 292 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 DBR1Q9UK59 544 aaKnown RBP25.05■■□□□ 1.6
IRF3-201ENST00000309877 SYNRGQ9UMZ2 1314 aa25.05■■□□□ 1.6
IRF3-201ENST00000309877 PSMA7O14818 248 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 FARP2O94887 1054 aaPredicted RBP25.04■■□□□ 1.6
IRF3-201ENST00000309877 GGPS1O95749 300 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 SUPT20HL2P0C7V6 817 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 YWHABP31946 246 aaKnown RBP25.04■■□□□ 1.6
IRF3-201ENST00000309877 HERC4Q5GLZ8 1057 aaPredicted RBP25.04■■□□□ 1.6
IRF3-201ENST00000309877 HPS3Q969F9 1004 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 REEP2Q9BRK0 252 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 KCND2Q9NZV8 630 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 LRRC37A2A6NM11 1700 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 BACH1O14867 736 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 AP5Z1O43299 807 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 TBCAO75347 108 aaKnown RBP25.04■■□□□ 1.6
IRF3-201ENST00000309877 APLP1P51693 650 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 EHHADHQ08426 723 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 TTLL4Q14679 1199 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 METTL7BQ6UX53 244 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 C1orf186Q6ZWK4 172 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 SCFD2Q8WU76 684 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 MAML3Q96JK9 1138 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 CAPNS2Q96L46 248 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 TRIM5Q9C035 493 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 VTA1Q9NP79 307 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 FANCLQ9NW38 375 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.04■■□□□ 1.6
IRF3-201ENST00000309877 NFE2L3Q9Y4A8 694 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 TELO2Q9Y4R8 837 aa25.04■■□□□ 1.6
IRF3-201ENST00000309877 FRMD3A2A2Y4 597 aa25.03■■□□□ 1.6
IRF3-201ENST00000309877 RASSF10A6NK89 507 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms