RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 POLR2MP0CAP2 368 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 SMIM10L2AP0DMW4 78 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 SMIM10L2BP0DMW5 78 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 GSPT1P15170 499 aaKnown RBP10.76□□□□□ -0.69
CNOT9-202ENST00000295701 PLA2G5P39877 138 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 MRPS9P82933 396 aaKnown RBP10.76□□□□□ -0.69
CNOT9-202ENST00000295701 GRM4Q14833 912 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 LAPTM4AQ15012 233 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 Q6ZNB5 142 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 SERINC5Q86VE9 423 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.76□□□□□ -0.69
CNOT9-202ENST00000295701 NLRP7Q8WX94 980 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 ATP6V0A1Q93050 837 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 C1QTNF1Q9BXJ1 281 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 RIOX1Q9H6W3 641 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 UBE2ZQ9H832 354 aaPredicted RBP10.76□□□□□ -0.69
CNOT9-202ENST00000295701 CNNM2Q9H8M5 875 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 MLXIPQ9HAP2 919 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 C11orf16Q9NQ32 467 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 SETD4Q9NVD3 440 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 RTEL1Q9NZ71 1219 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 LMCD1Q9NZU5 365 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 C5orf42Q9H799 3197 aa10.76□□□□□ -0.69
CNOT9-202ENST00000295701 C17orf102A2RUQ5 167 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 H3BRB1 525 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 HIP1O00291 1037 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 IFIT3O14879 490 aaKnown RBP10.75□□□□□ -0.69
CNOT9-202ENST00000295701 UPP2O95045 317 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 LGALS2P05162 132 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 CYP21A2P08686 494 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 CCND2P30279 289 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 NT5C2P49902 561 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 HTRA4P83105 476 aaPredicted RBP10.75□□□□□ -0.69
CNOT9-202ENST00000295701 PLEKHG4Q58EX7 1191 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 CYFIP1Q7L576 1253 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 TRIM50Q86XT4 487 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 RDH13Q8NBN7 331 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 FAM122AQ96E09 287 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 TUT1Q9H6E5 874 aaKnown RBP10.75□□□□□ -0.69
CNOT9-202ENST00000295701 INSL6Q9Y581 213 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 LOXHD1Q8IVV2 1947 aa10.75□□□□□ -0.69
CNOT9-202ENST00000295701 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.74□□□□□ -0.69
CNOT9-202ENST00000295701 GFRA3O60609 400 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 EFCAB14O75071 495 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 AMHP03971 560 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 TGFB3P10600 412 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 IL9P15248 144 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 KCNA5P22460 613 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 HOXC8P31273 242 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 SP4Q02446 784 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 EPC2Q52LR7 807 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 UTP14CQ5TAP6 766 aaKnown RBP10.74□□□□□ -0.69
CNOT9-202ENST00000295701 KCNV1Q6PIU1 500 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 YTHDC1Q96MU7 727 aaKnown RBP10.74□□□□□ -0.69
CNOT9-202ENST00000295701 PHOX2BQ99453 314 aa10.74□□□□□ -0.69
CNOT9-202ENST00000295701 MAP3K20Q9NYL2 800 aaKnown RBP10.74□□□□□ -0.69
CNOT9-202ENST00000295701 PNMA6FA0A0J9YX94 578 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 DDX11L8A8MPP1 907 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 RNF223E7ERA6 249 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 E7EWF7 191 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 ANTXR2P58335 489 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 TROAPQ12815 778 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 COL9A3Q14050 684 aaPredicted RBP10.73□□□□□ -0.69
CNOT9-202ENST00000295701 TMEM31Q5JXX7 168 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 USP17L6PQ6QN14 398 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 FAM178BQ8IXR5 827 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 TOP1MTQ969P6 601 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 GPR20Q99678 358 aa10.73□□□□□ -0.69
CNOT9-202ENST00000295701 SPATA31C2B4DYI2 1134 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 PI4K2BG5E9Z4 385 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 H3BQ06 376 aaPredicted RBP10.72□□□□□ -0.69
CNOT9-202ENST00000295701 NOP56O00567 594 aaKnown RBP10.72□□□□□ -0.69
CNOT9-202ENST00000295701 ADH1BP00325 375 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 CHMLP26374 656 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 ICAM3P32942 547 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 ADAM17P78536 824 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 TRDNQ13061 729 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 GPM6BQ13491 265 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 AAMPQ13685 434 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 WTAPQ15007 396 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 PUS10Q3MIT2 529 aaKnown RBP10.72□□□□□ -0.69
CNOT9-202ENST00000295701 LEXMQ3ZCV2 418 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 TCEAL5Q5H9L2 206 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 TTC22Q5TAA0 569 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 RUFY4Q6ZNE9 571 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 TMEM192Q8IY95 271 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 SAMD3Q8N6K7 520 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 IGDCC4Q8TDY8 1250 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 SEPT8Q92599 483 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 MRPL38Q96DV4 380 aaKnown RBP10.72□□□□□ -0.69
CNOT9-202ENST00000295701 INPP4AQ96PE3 977 aaPredicted RBP10.72□□□□□ -0.69
CNOT9-202ENST00000295701 YME1L1Q96TA2 773 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 MYL10Q9BUA6 226 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 FRMPD4Q14CM0 1322 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 EMSYQ7Z589 1322 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 TTC3P53804 2025 aa10.72□□□□□ -0.69
CNOT9-202ENST00000295701 MEIS2O14770 477 aa10.71□□□□□ -0.69
CNOT9-202ENST00000295701 GPR37L1O60883 481 aa10.71□□□□□ -0.69
CNOT9-202ENST00000295701 ATP9AO75110 1047 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms