RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RPAINQ86UA6 219 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 HOXC10Q9NYD6 342 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 ARAP2Q8WZ64 1704 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 KCNK3O14649 394 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 RBBP5Q15291 538 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 STAMQ92783 540 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 VCX3AQ9NNX9 186 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 GCLCP48506 637 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 MTMR2Q13614 643 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 KIFC2Q96AC6 838 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 SPATS2LQ9NUQ6 558 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 ZNF112Q9UJU3 913 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 DNM3Q9UQ16 869 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 ORC4O43929 436 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 CLTAP09496 248 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 BACE1P56817 501 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 DLK2Q6UY11 383 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 DPH6Q7L8W6 267 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 WDR18Q9BV38 432 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 NT5C3AQ9H0P0 336 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 BLZF1Q9H2G9 400 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 TACC3Q9Y6A5 838 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 SCN9AQ15858 1988 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 LRRD1A4D1F6 860 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 ARHGEF35A5YM69 484 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 FAM47AQ5JRC9 791 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 ZNF589Q86UQ0 364 aaPredicted RBP12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 NEDD1Q8NHV4 660 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 ZNF384Q8TF68 577 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 CCT6BQ92526 530 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 MYL10Q9BUA6 226 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 ZCCHC17Q9NP64 241 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 RTEL1Q9NZ71 1219 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 NYAP2Q9P242 653 aa12.91□□□□□ -0.34
SYNGAP1-201ENST00000293748 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 STK10O94804 968 aaKnown RBP12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 COPB2P35606 906 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 SLFN13Q68D06 897 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 DYMQ7RTS9 669 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 MGARPQ8TDB4 240 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 PAGR1Q9BTK6 254 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 RABGAP1Q9Y3P9 1069 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 SNCAIPQ9Y6H5 919 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 EXOC3O60645 756 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 SUN1O94901 812 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 EPHB4P54760 987 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 HTRA3P83110 453 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 SLC44A5Q8NCS7 719 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 ATP2A3Q93084 1043 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 SPTLC3Q9NUV7 552 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 NRBP1Q9UHY1 535 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 FZD1Q9UP38 647 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 EVI5O60447 810 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 FDX1P10109 184 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 AKR1B1P15121 316 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 ADCY7P51828 1080 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 PSMD6Q15008 389 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 CALCRLQ16602 461 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 ANKRD23Q86SG2 305 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 FAM160B2Q86V87 743 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 CCDC197Q8NCU1 140 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 COA7Q96BR5 231 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 VPS37BQ9H9H4 285 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 BIN2Q9UBW5 565 aaPredicted RBP12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 JRKLQ9Y4A0 524 aa12.9□□□□□ -0.34
SYNGAP1-201ENST00000293748 WDR46O15213 610 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 AOC2O75106 756 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 FMNL1O95466 1100 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 NDUFA8P51970 172 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 PTH1RQ03431 593 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 GEN1Q17RS7 908 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 DCUN1D2Q6PH85 259 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 GRK7Q8WTQ7 553 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 RUNDC3BQ96NL0 473 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 Q9H521 79 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 IRF6O14896 467 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 DKC1O60832 514 aaKnown RBP eCLIP12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 DTNBO60941 627 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 MRPS9P82933 396 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 SLC35F6Q8N357 371 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 FBXO18Q8NFZ0 1043 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 RILPQ96NA2 401 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 BACH1O14867 736 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 TBC1D8O95759 1140 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 H2AFZP0C0S5 128 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 TRIM68Q6AZZ1 485 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 H2AFVQ71UI9 128 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 TYW1Q9NV66 732 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 FKTNO75072 461 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 MYOCDQ8IZQ8 938 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 LSM14BQ9BX40 385 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 EPB41L4AQ9HCS5 686 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 VPS54Q9P1Q0 977 aa12.89□□□□□ -0.35
SYNGAP1-201ENST00000293748 PAPPA2Q9BXP8 1791 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 SHMT1P34896 483 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 PPARDQ03181 441 aa12.88□□□□□ -0.35
SYNGAP1-201ENST00000293748 SF3A3Q12874 501 aaKnown RBP eCLIP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms