RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SESTD1Q86VW0 696 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 HDAC11Q96DB2 347 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 NACC1Q96RE7 527 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 CALN1Q9BXU9 219 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 SEPT9Q9UHD8 586 aaPredicted RBP17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 LRRC53A6NM62 1247 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 PDHA1P08559 390 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 SUPT20HQ8NEM7 779 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 CCDC17Q96LX7 622 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 LRGUKQ96M69 825 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 WDR24Q96S15 920 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 TRPA1O75762 1119 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 CPP00450 1065 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 CHGBP05060 677 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 DDIT3P35638 169 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 NFRKBQ6P4R8 1299 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 CYB5R4Q7L1T6 521 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 ZC3H18Q86VM9 953 aaKnown RBP17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 RNF169Q8NCN4 708 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 ADPGKQ9BRR6 497 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 G3BP2Q9UN86 482 aaKnown RBP17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 MAGED2Q9UNF1 606 aaPredicted RBP17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 CCDC188H7C350 402 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 NCK2O43639 380 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 ACTN1P12814 892 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 H2AFXP16104 143 aaPredicted RBP17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 GFPT1Q06210 699 aaPredicted RBP17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 ADCY2Q08462 1091 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 NYAP1Q6ZVC0 841 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 PARVGQ9HBI0 331 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 KMT5AQ9NQR1 393 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 PPP1R37O75864 691 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 TARSL2A2RTX5 802 aaKnown RBP17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 SFI1A8K8P3 1242 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 FOXN1O15353 648 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 TOM1L1O75674 476 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 ATP5HO75947 161 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 ESRRAP11474 423 aaPredicted RBP17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 IL6STP40189 918 aaPredicted RBP17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 TRIM42Q8IWZ5 723 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 NIM1KQ8IY84 436 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 H0Y3Z8 333 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 GDF11O95390 407 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 FAM47EQ6ZV65 393 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 FHOD1Q9Y613 1164 aa17.73■□□□□ 0.43
SH3RF1-201ENST00000284637 ATP10DQ9P241 1426 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 MCF2LO15068 1137 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 IGBP1P78318 339 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 CUL3Q13618 768 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 MTF1Q14872 753 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 DNAJC24Q6P3W2 148 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 PITPNM3Q9BZ71 974 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 BHMT2Q9H2M3 363 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 SERPINB13Q9UIV8 391 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 HOOK2Q96ED9 719 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 OSBPL1AQ9BXW6 950 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 UGGT1Q9NYU2 1555 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 NEDD4P46934 1319 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 IGKV5-2P06315 115 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 MAGOHP61326 146 aaKnown RBP17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 FGD4Q96M96 766 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 MRPL47Q9HD33 250 aaKnown RBP17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 TTC26A0AVF1 554 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 ZNF579Q8NAF0 562 aaKnown RBP17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 WDR11Q9BZH6 1224 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 IRX2Q9BZI1 471 aaPredicted RBP17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 L2HGDHQ9H9P8 463 aa17.72■□□□□ 0.43
SH3RF1-201ENST00000284637 GOLGA8IPA6NC78 632 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 GOLGA8JA6NMD2 632 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 MAML1Q92585 1016 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 FAM149B1Q96BN6 582 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 TMEM206Q9H813 350 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 XDHP47989 1333 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 ATP7BP35670 1465 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 KRT3P12035 628 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 PLS3P13797 630 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 ESRRGP62508 458 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 CCDC92Q53HC0 331 aaPredicted RBP17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 BEND6Q5SZJ8 279 aaPredicted RBP17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 DARS2Q6PI48 645 aaKnown RBP17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 CCNYQ8ND76 341 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 MLXIPLQ9NP71 852 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 SCINQ9Y6U3 715 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 ADGBQ8N7X0 1667 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 ERFEQ4G0M1 354 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 CYTH2Q99418 400 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 EPN3Q9H201 632 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 NRBP2Q9NSY0 501 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 TTC37Q6PGP7 1564 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 ABL1P00519 1130 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 CXorf38Q8TB03 319 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 CEP170P1Q96L14 293 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 ATP6V1G3Q96LB4 118 aa17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.71■□□□□ 0.43
SH3RF1-201ENST00000284637 POTEMA6NI47 508 aa17.71■□□□□ 0.42
SH3RF1-201ENST00000284637 SNAP23O00161 211 aa17.71■□□□□ 0.42
SH3RF1-201ENST00000284637 CDC27P30260 824 aa17.71■□□□□ 0.42
SH3RF1-201ENST00000284637 IRAK1P51617 712 aa17.71■□□□□ 0.42
SH3RF1-201ENST00000284637 MECOMQ03112 1051 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms