RNA–Protein interactions for RNA: ENST00000243052.7

PDE1B-201, Transcript of phosphodiesterase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE1B, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-201ENST00000243052 LRRC23Q53EV4 343 aaPredicted RBP17.58■□□□□ 0.4
PDE1B-201ENST00000243052 PPP1R15BQ5SWA1 713 aa17.58■□□□□ 0.4
PDE1B-201ENST00000243052 DZIP1Q86YF9 867 aaKnown RBP17.58■□□□□ 0.4
PDE1B-201ENST00000243052 TRIM51Q9BSJ1 452 aa17.58■□□□□ 0.4
PDE1B-201ENST00000243052 SAP30BPQ9UHR5 308 aaKnown RBP17.58■□□□□ 0.4
PDE1B-201ENST00000243052 MAP3K13O43283 966 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 TUBP50607 506 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 RNF220Q5VTB9 566 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 NUGGCQ68CJ6 796 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 BLIDQ8IZY5 108 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 GDAP1Q8TB36 358 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 P3H4Q92791 437 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 CRNKL1Q9BZJ0 848 aaKnown RBP17.57■□□□□ 0.4
PDE1B-201ENST00000243052 NSRP1Q9H0G5 558 aaKnown RBP17.57■□□□□ 0.4
PDE1B-201ENST00000243052 FGFR1OP2Q9NVK5 253 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 RAD21O60216 631 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 ITGA4P13612 1032 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 MSH2P43246 934 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 CWF19L1Q69YN2 538 aaKnown RBP17.57■□□□□ 0.4
PDE1B-201ENST00000243052 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 EPAS1Q99814 870 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 FAM129AQ9BZQ8 928 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 ISCUQ9H1K1 167 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 PLAGL2Q9UPG8 496 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 hCG_2014768A0A024R1R8 64 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 CFAP73A6NFT4 308 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 CALM1P0DP23 149 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 CALM2P0DP24 149 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 CALM3P0DP25 149 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 FERP16591 822 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 IFI35P80217 286 aaPredicted RBP17.57■□□□□ 0.4
PDE1B-201ENST00000243052 FAM114A1Q8IWE2 563 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 P2RX5Q93086 422 aa17.57■□□□□ 0.4
PDE1B-201ENST00000243052 ANKRD33BA6NCL7 494 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 USP17L3A6NCW0 530 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 USP17L4A6NCW7 530 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 RTN3O95197 1032 aaPredicted RBP17.56■□□□□ 0.4
PDE1B-201ENST00000243052 RFC5P40937 340 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 USP17L1Q7RTZ2 530 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 MREGQ8N565 214 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 USP38Q8NB14 1042 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 BORCS6Q96GS4 357 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 TMEM60Q9H2L4 133 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 ETNK1Q9HBU6 452 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 TMEM165Q9HC07 324 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 LUC7LQ9NQ29 371 aaKnown RBP17.56■□□□□ 0.4
PDE1B-201ENST00000243052 ZMYND8Q9ULU4 1186 aaPredicted RBP17.56■□□□□ 0.4
PDE1B-201ENST00000243052 PHRF1Q9P1Y6 1649 aaKnown RBP17.56■□□□□ 0.4
PDE1B-201ENST00000243052 AHCYL1O43865 530 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 PLTPP55058 493 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 STK4Q13043 487 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 RPS6KC1Q96S38 1066 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
PDE1B-201ENST00000243052 FAM205AQ6ZU69 1335 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 TNFRSF8P28908 595 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 NCALDP61601 193 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 MECOMQ03112 1051 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 MTMR3Q13615 1198 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 SLMAPQ14BN4 828 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 LRIG3Q6UXM1 1119 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 CNBD1Q8NA66 436 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 CELF1Q92879 486 aaKnown RBP17.56■□□□□ 0.4
PDE1B-201ENST00000243052 TSKSQ9UJT2 592 aa17.56■□□□□ 0.4
PDE1B-201ENST00000243052 POLR2FP61218 127 aaKnown RBP17.55■□□□□ 0.4
PDE1B-201ENST00000243052 MKRN4PQ13434 485 aaPredicted RBP17.55■□□□□ 0.4
PDE1B-201ENST00000243052 MUM1Q2TAK8 710 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 SLC9C1Q4G0N8 1177 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 ERMARDQ5T6L9 678 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 DYMQ7RTS9 669 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
PDE1B-201ENST00000243052 IFT74Q96LB3 600 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 TTYH3Q9C0H2 523 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 CNTNAP5Q8WYK1 1306 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 KIF1AQ12756 1690 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 ERVV-1B6SEH8 477 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 SCNN1BP51168 640 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 TTI2Q6NXR4 508 aa17.55■□□□□ 0.4
PDE1B-201ENST00000243052 DUSP9Q99956 384 aaKnown RBP17.55■□□□□ 0.4
PDE1B-201ENST00000243052 RIOK1Q9BRS2 568 aaKnown RBP17.55■□□□□ 0.4
PDE1B-201ENST00000243052 DBR1Q9UK59 544 aaKnown RBP17.55■□□□□ 0.4
PDE1B-201ENST00000243052 UTP11Q9Y3A2 253 aaKnown RBP17.55■□□□□ 0.4
PDE1B-201ENST00000243052 MYO5AQ9Y4I1 1855 aaKnown RBP17.55■□□□□ 0.4
PDE1B-201ENST00000243052 SPDYE3A6NKU9 549 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 TCP11X1B4DZS4 312 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 FUT2Q10981 343 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 PNMA1Q8ND90 353 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 ATRNO75882 1429 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 FESP07332 822 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 ERFP50548 548 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 CCDC6Q16204 474 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 TBC1D25Q3MII6 688 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 RNF10Q8N5U6 811 aaKnown RBP17.54■□□□□ 0.4
PDE1B-201ENST00000243052 C5orf60A6NFR6 353 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 MARCH6O60337 910 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 CCNT1O60563 726 aaKnown RBP17.54■□□□□ 0.4
PDE1B-201ENST00000243052 EPS15P42566 896 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 DENND2CQ68D51 928 aa17.54■□□□□ 0.4
PDE1B-201ENST00000243052 SYCP3Q8IZU3 236 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms