RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 KCNV1Q6PIU1 500 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 USP17L6PQ6QN14 398 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 USP49Q70CQ1 688 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 CCDC186Q7Z3E2 898 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 KRT25Q7Z3Z0 450 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 VSIG10LQ86VR7 867 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 DRC7Q8IY82 874 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 SH3TC2Q8TF17 1288 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 SCFD2Q8WU76 684 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 TBC1D5Q92609 795 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 SYMPKQ92797 1274 aaKnown RBP11.53□□□□□ -0.56
PHGDH-224ENST00000641711 SMARCE1Q969G3 411 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 ABHD8Q96I13 439 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 TAAR1Q96RJ0 339 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 ANO3Q9BYT9 981 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 KATNBL1Q9H079 304 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 DACH1Q9UI36 760 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-224ENST00000641711 CCDC194A0A1B0GVG4 234 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 ADAMTS3O15072 1205 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 ZNF865P0CJ78 1059 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-224ENST00000641711 TGFB3P10600 412 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 CCL5P13501 91 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 EIF2AK2P19525 551 aaKnown RBP11.52□□□□□ -0.57
PHGDH-224ENST00000641711 BMP6P22004 513 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 PRPHP41219 470 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 NOLC1Q14978 699 aaKnown RBP eCLIP11.52□□□□□ -0.57
PHGDH-224ENST00000641711 IQSEC1Q6DN90 963 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 MOXD1Q6UVY6 613 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 FCHSD1Q86WN1 690 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 PAGE5Q96GU1 130 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 EPSTI1Q96J88 318 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 CDHR1Q96JP9 859 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 INPP4AQ96PE3 977 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-224ENST00000641711 HSD3B7Q9H2F3 369 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 IMPACTQ9P2X3 320 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 FAM184BQ9ULE4 1060 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 Q9Y3F1 56 aa11.52□□□□□ -0.57
PHGDH-224ENST00000641711 A0A087X0B3 334 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 MAFGO15525 162 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 CYP3A4P08684 503 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 ERCC5P28715 1186 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-224ENST00000641711 MCM7P33993 719 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 GSDMDP57764 484 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 NKX3-2P78367 333 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 TTLL4Q14679 1199 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 E2F4Q16254 413 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 IL17AQ16552 155 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 UBE2SQ16763 222 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 NIPA1Q7RTP0 329 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 IQUBQ8NA54 791 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 ANKLE1Q8NAG6 615 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 ENOX1Q8TC92 643 aaKnown RBP11.51□□□□□ -0.57
PHGDH-224ENST00000641711 CRYGNQ8WXF5 182 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 GPRASP2Q96D09 838 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 GSDMAQ96QA5 445 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 NAP1L4Q99733 375 aaKnown RBP11.51□□□□□ -0.57
PHGDH-224ENST00000641711 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
PHGDH-224ENST00000641711 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
PHGDH-224ENST00000641711 ZHX1Q9UKY1 873 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-224ENST00000641711 VWA3AA6NCI4 1184 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 DUSP11O75319 330 aaKnown RBP11.5□□□□□ -0.57
PHGDH-224ENST00000641711 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 RARBP10826 455 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 GCFC2P16383 781 aaKnown RBP11.5□□□□□ -0.57
PHGDH-224ENST00000641711 ICAM3P32942 547 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 CIITAP33076 1130 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 GJA8P48165 433 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 ARHGAP4P98171 946 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 SETQ01105 290 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-224ENST00000641711 DPYDQ12882 1025 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 TRIM32Q13049 653 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 NONOQ15233 471 aaKnown RBP eCLIP11.5□□□□□ -0.57
PHGDH-224ENST00000641711 CCDC144BQ3MJ40 725 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 DUSP28Q4G0W2 176 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 PDXDC2PQ6P474 469 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 NLRX1Q86UT6 975 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 FBXO16Q8IX29 292 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-224ENST00000641711 PDILTQ8N807 584 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 TRPV1Q8NER1 839 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 DHX58Q96C10 678 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 CCSER1Q9C0I3 900 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 CRISPLD2Q9H0B8 497 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 UNC93B1Q9H1C4 597 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 SPC25Q9HBM1 224 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 PYCARDQ9ULZ3 195 aa11.5□□□□□ -0.57
PHGDH-224ENST00000641711 CBFA2T2O43439 604 aa11.49□□□□□ -0.57
PHGDH-224ENST00000641711 CST5P28325 142 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-224ENST00000641711 CCND3P30281 292 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-224ENST00000641711 TXLNAP40222 546 aa11.49□□□□□ -0.57
PHGDH-224ENST00000641711 USP11P51784 963 aa11.49□□□□□ -0.57
PHGDH-224ENST00000641711 FANCCQ00597 558 aa11.49□□□□□ -0.57
PHGDH-224ENST00000641711 MTFR1Q15390 333 aa11.49□□□□□ -0.57
PHGDH-224ENST00000641711 ISM2Q6H9L7 571 aa11.49□□□□□ -0.57
PHGDH-224ENST00000641711 TAPT1Q6NXT6 567 aa11.49□□□□□ -0.57
PHGDH-224ENST00000641711 DTHD1Q6ZMT9 781 aa11.49□□□□□ -0.57
PHGDH-224ENST00000641711 GIMAP8Q8ND71 665 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms