RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 AMACRQ9UHK6 382 aa9.32□□□□□ -0.92
CHD2-226ENST00000636881 TMEM59LQ9UK28 342 aa9.32□□□□□ -0.92
CHD2-226ENST00000636881 ATP8A1Q9Y2Q0 1164 aa9.32□□□□□ -0.92
CHD2-226ENST00000636881 UTP11Q9Y3A2 253 aaKnown RBP9.32□□□□□ -0.92
CHD2-226ENST00000636881 NOC2LQ9Y3T9 749 aaKnown RBP9.32□□□□□ -0.92
CHD2-226ENST00000636881 CFAP73A6NFT4 308 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 F8W031 263 aaPredicted RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 TRAF5O00463 557 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 TLR2O60603 784 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 ANP32DO95626 131 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 MMEP08473 750 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 VIMP08670 466 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 IGHMBP2P38935 993 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 PEX19P40855 299 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 COBLL1Q53SF7 1204 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 ERMARDQ5T6L9 678 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 TMC3Q7Z5M5 1100 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 MAB21L3Q8N8X9 362 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 SYN2Q92777 582 aaPredicted RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 SPAG5Q96R06 1193 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 FAM114A2Q9NRY5 505 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 C15orf41Q9Y2V0 281 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 CASZ1Q86V15 1759 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 SMIM23A6NLE4 172 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 F8VZ95 297 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 CES2O00748 559 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 CHN1P15882 459 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 USP11P51784 963 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 CCNHP51946 323 aaPredicted RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 KCTD19Q17RG1 926 aaPredicted RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 ACTRT1Q8TDG2 376 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 DDX17Q92841 729 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 CALR3Q96L12 384 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 ELAC2Q9BQ52 826 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.31□□□□□ -0.922e-7■■■□□ 15.4
CHD2-226ENST00000636881 NSRP1Q9H0G5 558 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 NOP53Q9NZM5 478 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 L3MBTL1Q9Y468 752 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 COL4A3BPQ9Y5P4 624 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 PLCH1Q4KWH8 1693 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 EIF3BP55884 814 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 CRELD2Q6UXH1 353 aaPredicted RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 MICAL1Q8TDZ2 1067 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 RIOK1Q9BRS2 568 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 SPATS2LQ9NUQ6 558 aaKnown RBP9.31□□□□□ -0.92
CHD2-226ENST00000636881 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
CHD2-226ENST00000636881 ARAP2Q8WZ64 1704 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 PVALEFA0A1B0GWK0 134 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 MYMKA6NI61 221 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 TTI1O43156 1089 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 ITIH4Q14624 930 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 GALNT17Q6IS24 598 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 ARHGAP27Q6ZUM4 889 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 PEX26Q7Z412 305 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 SLITRK6Q9H5Y7 841 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 EBF2Q9HAK2 575 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 CAND2O75155 1236 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 TXKP42681 527 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 GNAQP50148 359 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 BIRC2Q13490 618 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 SLMAPQ14BN4 828 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 NONOQ15233 471 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHD2-226ENST00000636881 SLC4A8Q2Y0W8 1093 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 LRRC55Q6ZSA7 311 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 LRRC34Q8IZ02 419 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 METTL13Q8N6R0 699 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 LMBR1Q8WVP7 490 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 LARP4BQ92615 738 aaKnown RBP9.3□□□□□ -0.92
CHD2-226ENST00000636881 CENPTQ96BT3 561 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 FMO2Q99518 471 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 CELF4Q9BZC1 486 aaKnown RBP9.3□□□□□ -0.92
CHD2-226ENST00000636881 RIC8AQ9NPQ8 531 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHD2-226ENST00000636881 ITGA4P13612 1032 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 NAPAP54920 295 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 TMED8Q6PL24 325 aaPredicted RBP9.3□□□□□ -0.92
CHD2-226ENST00000636881 TRPM8Q7Z2W7 1104 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 KRT25Q7Z3Z0 450 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 DAAM2Q86T65 1068 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 DZIP3Q86Y13 1208 aaKnown RBP9.3□□□□□ -0.92
CHD2-226ENST00000636881 MYOCDQ8IZQ8 938 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 PNMA1Q8ND90 353 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 CCDC113Q9H0I3 377 aa9.3□□□□□ -0.92
CHD2-226ENST00000636881 INTS9Q9NV88 658 aaKnown RBP9.3□□□□□ -0.92
CHD2-226ENST00000636881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHD2-226ENST00000636881 ALS2Q96Q42 1657 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 DLEC1Q9Y238 1755 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 ASAP2O43150 1006 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 DIAPH2O60879 1101 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 NOL4O94818 638 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 FKBP3Q00688 224 aaKnown RBP9.29□□□□□ -0.92
CHD2-226ENST00000636881 EVX2Q03828 476 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 RIPK1Q13546 671 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 CAPRIN2Q6IMN6 1127 aaKnown RBP9.29□□□□□ -0.92
CHD2-226ENST00000636881 BZW1Q7L1Q6 419 aaKnown RBP9.29□□□□□ -0.92
CHD2-226ENST00000636881 PROSER2Q86WR7 435 aaPredicted RBP9.29□□□□□ -0.92
CHD2-226ENST00000636881 DAGLBQ8NCG7 672 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 AGAP11Q8TF27 550 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 TLCD1Q96CP7 247 aa9.29□□□□□ -0.92
CHD2-226ENST00000636881 KIF9Q9HAQ2 790 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms