RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 PRPSAP2O60256 369 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 FOSP01100 380 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 BMP3P12645 472 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 NCF2P19878 526 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 DNAJC24Q6P3W2 148 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 USP17L2Q6R6M4 530 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 USP28Q96RU2 1077 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 TSR3Q9UJK0 312 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 YEATS2Q9ULM3 1422 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 NUDCD1Q96RS6 583 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 GFPT2O94808 682 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 CAPS2Q9BXY5 557 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 HOXA13P31271 388 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 ZNF341Q9BYN7 854 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 SCRN1Q12765 414 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 STAG1Q8WVM7 1258 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 COG4Q9H9E3 785 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 INTUQ9ULD6 942 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 PPP2R2CQ9Y2T4 447 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 EPN1Q9Y6I3 576 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 SLC4A7Q9Y6M7 1214 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 NEMP1O14524 444 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 OR6B2Q6IFH4 312 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 SPOPLQ6IQ16 392 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 PCGF5Q86SE9 256 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 SCYL3Q8IZE3 742 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 IL9RQ01113 521 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 RUNDC3BQ96NL0 473 aa17.23■□□□□ 0.35
CACNA1A-221ENST00000636012 ZWILCHQ9H900 591 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 HPS4Q9NQG7 708 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 G3BP2Q9UN86 482 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 ARHGEF37A1IGU5 675 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 USP17L3A6NCW0 530 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 USP17L4A6NCW7 530 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 ENC1O14682 589 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 USP17L1Q7RTZ2 530 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 TBCKQ8TEA7 893 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 CCDC17Q96LX7 622 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 THEM5Q8N1Q8 247 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 POLR3CQ9BUI4 534 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 ARHGDIAP52565 204 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 KIF19Q2TAC6 998 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 KLC3Q6P597 504 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 TRIM67Q6ZTA4 783 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 EEF1DP29692 281 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 ARL13BQ3SXY8 428 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 PIDD1Q9HB75 910 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 ESRRBO95718 433 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 PSAPP07602 524 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 COPB1P53618 953 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 VCPP55072 806 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 TRIP13Q15645 432 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 FBXL13Q8NEE6 735 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 SNX19Q92543 992 aa17.22■□□□□ 0.35
CACNA1A-221ENST00000636012 KRT80Q6KB66 452 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 GAP43P17677 238 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 UBE2SQ16763 222 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 FASTKD5Q7L8L6 764 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 PPP1R9AQ9ULJ8 1098 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 SPATA1Q5VX52 437 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 SMAP1Q8IYB5 467 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 ABHD8Q96I13 439 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 PDE8BO95263 885 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 CDHR1Q96JP9 859 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 SPZ1Q9BXG8 430 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 GIMAP4Q9NUV9 329 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 HPCAL4Q9UM19 191 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 F8W8V4 182 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 OR6B3Q8NGW1 331 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 CCDC124Q96CT7 223 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 TRIM11Q96F44 468 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 PNMA3Q9UL41 463 aa17.21■□□□□ 0.35
CACNA1A-221ENST00000636012 DENND3A2RUS2 1198 aa17.21■□□□□ 0.34
CACNA1A-221ENST00000636012 ZKSCAN8Q15776 578 aaPredicted RBP17.21■□□□□ 0.34
CACNA1A-221ENST00000636012 RASIP1Q5U651 963 aa17.21■□□□□ 0.34
CACNA1A-221ENST00000636012 ARMCX2Q7L311 632 aa17.21■□□□□ 0.34
CACNA1A-221ENST00000636012 INTS9Q9NV88 658 aaKnown RBP17.21■□□□□ 0.34
CACNA1A-221ENST00000636012 GEMIN8Q9NWZ8 242 aaKnown RBP17.21■□□□□ 0.34
CACNA1A-221ENST00000636012 CDV3Q9UKY7 258 aaKnown RBP17.21■□□□□ 0.34
CACNA1A-221ENST00000636012 ATP10DQ9P241 1426 aa17.21■□□□□ 0.34
CACNA1A-221ENST00000636012 SCN4BQ8IWT1 228 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 LRRC8AQ8IWT6 810 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 ZMYND10O75800 440 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 DRP2Q13474 957 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 ANKRD20A4Q4UJ75 823 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 ANKRD20A8PQ5CZ79 823 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 ANKRD20A2Q5SQ80 823 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 ANKRD20A1Q5TYW2 823 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 ATP8A1Q9Y2Q0 1164 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 GOLGA8IPA6NC78 632 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 GOLGA8JA6NMD2 632 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 FLOT2Q14254 428 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 PTPN21Q16825 1174 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 NDUFAF2Q8N183 169 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 FAM133AQ8N9E0 248 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 TRIM4Q9C037 500 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 ATG3Q9NT62 314 aa17.2■□□□□ 0.34
CACNA1A-221ENST00000636012 RBM6P78332 1123 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms