RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 CHD2O14647 1828 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 DAPK1P53355 1430 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PPP1R37O75864 691 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ARIH2O95376 493 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 COL6A1P12109 1028 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TMEM11P17152 192 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PRKACAP17612 351 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 MX2P20592 715 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 CSNK2BP67870 215 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PPIDQ08752 370 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 NFE2L1Q14494 772 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 VEPH1Q14D04 833 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 FAM180BQ6P0A1 224 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 BPHLQ86WA6 291 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 NPAS4Q8IUM7 802 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 GRAMD2AQ8IUY3 354 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 CCDC116Q8IYX3 515 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LRRC47Q8N1G4 583 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ZBTB8BQ8NAP8 495 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LILRB1Q8NHL6 650 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TMX3Q96JJ7 454 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 DESI2Q9BSY9 194 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 FUCA2Q9BTY2 467 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 MTMR12Q9C0I1 747 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 GALNT8Q9NY28 637 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 MALT1Q9UDY8 824 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 CAPN11Q9UMQ6 739 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 RRP7AQ9Y3A4 280 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SETBP1Q9Y6X0 1596 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ANKRD50Q9ULJ7 1429 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TNRC18O15417 2968 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LRRIQ4A6NIV6 560 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 GOLGA8CPA6NN73 597 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LRRIQ3A6PVS8 624 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SGK1O00141 431 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ZBTB39O15060 712 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SRGAP3O43295 1099 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TSPAN6O43657 245 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SULT1B1O43704 296 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TGDSO95455 350 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 POLR3DP05423 398 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PRKACBP22694 351 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 MTHFRP42898 656 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 GCLCP48506 637 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 MRPS5P82675 430 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 CD83Q01151 205 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LRMPQ12912 555 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SMAD4Q13485 552 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 KLC3Q6P597 504 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 VPS36Q86VN1 386 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PLA2G4DQ86XP0 818 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LRRC8AQ8IWT6 810 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 GOLM1Q8NBJ4 401 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 OSCP1Q8WVF1 389 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LMBR1Q8WVP7 490 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SH3GL2Q99962 352 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ZBTB40Q9NUA8 1239 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 DNAI1Q9UI46 699 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 FAF1Q9UNN5 650 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PCDHGA3Q9Y5H0 932 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ADGRB3O60242 1522 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ASXL1Q8IXJ9 1541 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TRIM43BA6NCK2 446 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 F8W810 466 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ENC1O14682 589 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 RIMBP2O15034 1052 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ZEB2O60315 1214 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 GADD45BO75293 160 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LUC7L3O95232 432 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 BAG2O95816 211 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 KCNJ6P48051 423 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ST13P50502 369 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 IGSF11Q5DX21 431 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LRRC31Q6UY01 552 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 TAS1R3Q7RTX0 852 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 REXO1L1PQ8IX06 675 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PGBD3Q8N328 593 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 GOT1L1Q8NHS2 421 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 OPTNQ96CV9 577 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LRGUKQ96M69 825 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 JAKMIP1Q96N16 626 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ACAP3Q96P50 834 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 APBA2Q99767 749 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 C12orf4Q9NQ89 552 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 FARSBQ9NSD9 589 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 MTRRQ9UBK8 725 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PA2G4Q9UQ80 394 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SH3GLB1Q9Y371 365 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 NUTM2FA1L443 756 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SH3D21A4FU49 640 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PSDA5PKW4 1024 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 PRRT4C9JH25 899 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 NVLO15381 856 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 BUB1BO60566 1050 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SIN3BO75182 1162 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 SNX4O95219 450 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 BCRP11274 1271 aa4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 ACAT1P24752 427 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-220ENST00000628915 LONP1P36776 959 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms