RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 RPS6KA3P51812 740 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 IFI35P80217 286 aaPredicted RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 RNASELQ05823 741 aaKnown RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 LETM2Q2VYF4 491 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 VWA3BQ502W6 1294 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 ZNF449Q6P9G9 518 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 MAB21L3Q8N8X9 362 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 USP38Q8NB14 1042 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 GPR108Q9NPR9 543 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 ARPP21Q9UBL0 812 aaPredicted RBP10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 STK36Q9NRP7 1315 aa10.66□□□□□ -0.7
TNFAIP3-210ENST00000620204 hCG_2014768A0A024R1R8 64 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 DPPA5A6NC42 116 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 F8W031 263 aaPredicted RBP10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 ATP4AP20648 1035 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 ATP2C1P98194 919 aaPredicted RBP10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 UAP1Q16222 522 aaPredicted RBP10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 TTI2Q6NXR4 508 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 B4GALNT2Q8NHY0 566 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 CERKQ8TCT0 537 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 RNF26Q9BY78 433 aaPredicted RBP10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 ISCUQ9H1K1 167 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 PNMA3Q9UL41 463 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 TCP11X1B4DZS4 312 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 STXBP3O00186 592 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 SUN1O94901 812 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 KRT16P08779 473 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 VEGFAP15692 232 aaPredicted RBP10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 ITGA6P23229 1130 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 CCND1P24385 295 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 GBP1P32455 592 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 FAM47AQ5JRC9 791 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 TMEM154Q6P9G4 183 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 HEATR3Q7Z4Q2 680 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 VAT1LQ9HCJ6 419 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 EPB41L4AQ9HCS5 686 aaPredicted RBP10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 DNAJC17Q9NVM6 304 aaKnown RBP10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 RNF14Q9UBS8 474 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 SH3BP1Q9Y3L3 701 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 USH1CQ9Y6N9 552 aa10.65□□□□□ -0.7
TNFAIP3-210ENST00000620204 RASSF10A6NK89 507 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 CYP7A1P22680 504 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 INHBEP58166 350 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 ITIH3Q06033 890 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 CUL1Q13616 776 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 LRRC23Q53EV4 343 aaPredicted RBP10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 LCORLQ8N3X6 602 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 DUSP9Q99956 384 aaKnown RBP10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 PIDD1Q9HB75 910 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 LRRC4CQ9HCJ2 640 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 GGA2Q9UJY4 613 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 ALS2Q96Q42 1657 aa10.65□□□□□ -0.71
TNFAIP3-210ENST00000620204 ROBO1Q9Y6N7 1651 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 CFAP73A6NFT4 308 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 TMEM110-MUSTN1A8MSY1 372 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 H7C1W4 665 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 PGRMC1O00264 195 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 SMNDC1O75940 238 aaKnown RBP eCLIP10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 PLCG1P19174 1290 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 ABCB4P21439 1286 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 MSH2P43246 934 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 RASIP1Q5U651 963 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 INTS8Q75QN2 995 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 PTF1AQ7RTS3 328 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 CABP7Q86V35 215 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 MAGEC3Q8TD91 643 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 P3H4Q92791 437 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 DHTKD1Q96HY7 919 aaPredicted RBP10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 CNOT10Q9H9A5 744 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 TECP42680 631 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 C11orf91Q3C1V1 193 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 CD302Q8IX05 232 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 TRIM7Q9C029 511 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 BIN2Q9UBW5 565 aaPredicted RBP10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 TBK1Q9UHD2 729 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 SPATA31A1Q5TZJ5 1347 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 A0A087X0T9 212 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 FGFR1OPO95684 399 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 FGGP02679 453 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 FAM228BP0C875 321 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 LRIG3Q6UXM1 1119 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 MRRFQ96E11 262 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 TSG101Q99816 390 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 FAM129AQ9BZQ8 928 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 MTFR1LQ9H019 292 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 ZMYND12Q9H0C1 365 aa10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 NOC2LQ9Y3T9 749 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-210ENST00000620204 SPDYE5A6NIY4 337 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 CCDC169A6NNP5 214 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 NMT2O60551 498 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 TXKP42681 527 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 ZNF211Q13398 564 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 BYSLQ13895 437 aaKnown RBP10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 SLMAPQ14BN4 828 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 IL17AQ16552 155 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 RUBCNQ92622 972 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 GLG1Q92896 1179 aa10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 ARHGEF2Q92974 986 aaKnown RBP10.63□□□□□ -0.71
TNFAIP3-210ENST00000620204 PURBQ96QR8 312 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms