RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ATP11AP98196 1134 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 TFAP4Q01664 338 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 PPP2R5BQ15173 497 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 ARL6IP4Q66PJ3 421 aaKnown RBP7.28□□□□□ -1.24
LMO3-235ENST00000616247 NUGGCQ68CJ6 796 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 GIGYF2Q6Y7W6 1299 aaKnown RBP7.28□□□□□ -1.24
LMO3-235ENST00000616247 ADGRA1Q86SQ6 560 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 HOOK3Q86VS8 718 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 U2AF1L4Q8WU68 220 aaKnown RBP7.28□□□□□ -1.24
LMO3-235ENST00000616247 ISCA1Q9BUE6 129 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 ECT2Q9H8V3 914 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 LRRC4CQ9HCJ2 640 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 MCM9Q9NXL9 1143 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 TMOD3Q9NYL9 352 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 ARPP21Q9UBL0 812 aaPredicted RBP7.28□□□□□ -1.24
LMO3-235ENST00000616247 DBR1Q9UK59 544 aaKnown RBP7.28□□□□□ -1.24
LMO3-235ENST00000616247 MYH15Q9Y2K3 1946 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 GRID2IPA4D2P6 1211 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 STARD3NLO95772 234 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 SHBGP04278 402 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 DRD4P21917 467 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 IFI35P80217 286 aaPredicted RBP7.28□□□□□ -1.24
LMO3-235ENST00000616247 MXRA7P84157 204 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 CUL1Q13616 776 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 RBBP5Q15291 538 aaKnown RBP7.28□□□□□ -1.24
LMO3-235ENST00000616247 TRPM8Q7Z2W7 1104 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 KIAA0895Q8NCT3 520 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 CCT6BQ92526 530 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 ANKS1AQ92625 1134 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 GLG1Q92896 1179 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 HOOK2Q96ED9 719 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 BMP2KQ9NSY1 1161 aaPredicted RBP7.28□□□□□ -1.24
LMO3-235ENST00000616247 SLC12A6Q9UHW9 1150 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 PCDHA4Q9UN74 947 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 C15orf41Q9Y2V0 281 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 SPATA31A3Q5VYP0 1347 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 CNTNAP5Q8WYK1 1306 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 LRRC37A3O60309 1634 aa7.28□□□□□ -1.24
LMO3-235ENST00000616247 ORC4O43929 436 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 XRCC4Q13426 336 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 NAB2Q15742 525 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 NPY5RQ15761 445 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 PFKFB3Q16875 520 aaPredicted RBP7.27□□□□□ -1.24
LMO3-235ENST00000616247 ARMC3Q5W041 872 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 ZNF662Q6ZS27 426 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 BZW1Q7L1Q6 419 aaKnown RBP7.27□□□□□ -1.24
LMO3-235ENST00000616247 NLRP10Q86W26 655 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 METTL13Q8N6R0 699 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 PNMA1Q8ND90 353 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 SNX29Q8TEQ0 813 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 RUBCNQ92622 972 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 KBTBD4Q9NVX7 518 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 IRAK4Q9NWZ3 460 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 ASAP1Q9ULH1 1129 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 TRIM33Q9UPN9 1127 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 SIK3Q9Y2K2 1263 aa7.27□□□□□ -1.24
LMO3-235ENST00000616247 FMN2Q9NZ56 1722 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 PIK3C2AO00443 1686 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 A0A1W2PQJ5 194 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 POTEMA6NI47 508 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 WTIPA6NIX2 430 aaPredicted RBP7.27□□□□□ -1.25
LMO3-235ENST00000616247 ALDH5A1P51649 535 aaPredicted RBP7.27□□□□□ -1.25
LMO3-235ENST00000616247 EVA1CP58658 441 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 FUT2Q10981 343 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 HERC4Q5GLZ8 1057 aaPredicted RBP7.27□□□□□ -1.25
LMO3-235ENST00000616247 ALKBH5Q6P6C2 394 aaKnown RBP7.27□□□□□ -1.25
LMO3-235ENST00000616247 FAM43BQ6ZT52 329 aaPredicted RBP7.27□□□□□ -1.25
LMO3-235ENST00000616247 ERICH1Q86X53 443 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 EGFL6Q8IUX8 553 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 CD302Q8IX05 232 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 GJA10Q969M2 543 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 INPP4AQ96PE3 977 aaPredicted RBP7.27□□□□□ -1.25
LMO3-235ENST00000616247 ZMYND12Q9H0C1 365 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 ZCWPW1Q9H0M4 648 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 PRDM11Q9NQV5 511 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 FGFR1OP2Q9NVK5 253 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 PTPN22Q9Y2R2 807 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 ATP6V0A2Q9Y487 856 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 MRC1P22897 1456 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 ARHGAP23Q9P227 1491 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 DIP2AQ14689 1571 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 MYMKA6NI61 221 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 F8W031 263 aaPredicted RBP7.27□□□□□ -1.25
LMO3-235ENST00000616247 PDE8AO60658 829 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 HIP1RO75146 1068 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 LGR5O75473 907 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 FGFR4P22455 802 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 TNNI2P48788 182 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 UBE4AQ14139 1066 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 IFI16Q16666 785 aaKnown RBP7.27□□□□□ -1.25
LMO3-235ENST00000616247 MEI1Q5TIA1 1274 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 LRIG3Q6UXM1 1119 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 ARMC9Q7Z3E5 817 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 VPS36Q86VN1 386 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 VSIG1Q86XK7 387 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 MYOCDQ8IZQ8 938 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 LRRC15Q8TF66 581 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 TBC1D22AQ8WUA7 517 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 TNFRSF25Q93038 417 aa7.27□□□□□ -1.25
LMO3-235ENST00000616247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms