RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 USP26Q9BXU7 913 aa20.1■□□□□ 0.81
RETREG3-210ENST00000590541 ZSWIM5Q9P217 1185 aa20.1■□□□□ 0.81
RETREG3-210ENST00000590541 CD207Q9UJ71 328 aa20.1■□□□□ 0.81
RETREG3-210ENST00000590541 PCDHA1Q9Y5I3 950 aa20.1■□□□□ 0.81
RETREG3-210ENST00000590541 ZBTB5O15062 677 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 CSPG5O95196 566 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 CHRNA1P02708 482 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 MMP1P03956 469 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 GNAT1P11488 350 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 ADAM15Q13444 863 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 TRIM50Q86XT4 487 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 ZNF689Q96CS4 500 aaPredicted RBP20.09■□□□□ 0.81
RETREG3-210ENST00000590541 MSLNLQ96KJ4 702 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 TELO2Q9Y4R8 837 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 LAMA4Q16363 1823 aa20.09■□□□□ 0.81
RETREG3-210ENST00000590541 HIP1O00291 1037 aa20.08■□□□□ 0.81
RETREG3-210ENST00000590541 NOP56O00567 594 aaKnown RBP20.08■□□□□ 0.81
RETREG3-210ENST00000590541 METTL7BQ6UX53 244 aa20.08■□□□□ 0.81
RETREG3-210ENST00000590541 TRIM67Q6ZTA4 783 aa20.08■□□□□ 0.81
RETREG3-210ENST00000590541 LMBR1Q8WVP7 490 aa20.08■□□□□ 0.81
RETREG3-210ENST00000590541 GPR20Q99678 358 aa20.08■□□□□ 0.81
RETREG3-210ENST00000590541 EHMT1Q9H9B1 1298 aa20.08■□□□□ 0.81
RETREG3-210ENST00000590541 ALG13Q9NP73 1137 aaKnown RBP20.08■□□□□ 0.81
RETREG3-210ENST00000590541 TMEM221A6NGB7 291 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 M0R296 226 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 EYA4O95677 639 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 GHRP10912 638 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 ICAM3P32942 547 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 PTPN5P54829 565 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 MRPS9P82933 396 aaKnown RBP20.07■□□□□ 0.8
RETREG3-210ENST00000590541 ARHGAP4P98171 946 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 SEMA3FQ13275 785 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 CYFIP1Q7L576 1253 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 FCHSD1Q86WN1 690 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 PBXIP1Q96AQ6 731 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 MAD2L2Q9UI95 211 aa20.07■□□□□ 0.8
RETREG3-210ENST00000590541 USP34Q70CQ2 3546 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 KLRF2D3W0D1 207 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 GCOM1H8Y6P7 765 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-210ENST00000590541 ENPP3O14638 875 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 POLR2MP0CAP2 368 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 SDSP20132 328 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 MGAT3Q09327 533 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 TCF15Q12870 199 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 BTG3Q14201 252 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-210ENST00000590541 NEDD9Q14511 834 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 LPIN1Q14693 890 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 SLC35G1Q2M3R5 365 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 INPP4AQ96PE3 977 aaPredicted RBP20.06■□□□□ 0.8
RETREG3-210ENST00000590541 PLVAPQ9BX97 442 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 CLEC1BQ9P126 229 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 PLAGL2Q9UPG8 496 aa20.06■□□□□ 0.8
RETREG3-210ENST00000590541 SPATA31C2B4DYI2 1134 aa20.05■□□□□ 0.8
RETREG3-210ENST00000590541 DGKIO75912 1065 aa20.05■□□□□ 0.8
RETREG3-210ENST00000590541 DNAJB1P25685 340 aa20.05■□□□□ 0.8
RETREG3-210ENST00000590541 NDUFV1P49821 464 aa20.05■□□□□ 0.8
RETREG3-210ENST00000590541 RUFY4Q6ZNE9 571 aa20.05■□□□□ 0.8
RETREG3-210ENST00000590541 ADGRD2Q7Z7M1 963 aa20.05■□□□□ 0.8
RETREG3-210ENST00000590541 ZNF215Q9UL58 517 aaPredicted RBP20.05■□□□□ 0.8
RETREG3-210ENST00000590541 DOCK5Q9H7D0 1870 aa20.05■□□□□ 0.8
RETREG3-210ENST00000590541 FRMPD4Q14CM0 1322 aa20.04■□□□□ 0.8
RETREG3-210ENST00000590541 PALM3A6NDB9 673 aaPredicted RBP20.04■□□□□ 0.8
RETREG3-210ENST00000590541 LOC730098B7Z3J9 87 aa20.04■□□□□ 0.8
RETREG3-210ENST00000590541 ST18O60284 1047 aa20.04■□□□□ 0.8
RETREG3-210ENST00000590541 ZXDAP98168 799 aa20.04■□□□□ 0.8
RETREG3-210ENST00000590541 GNPTABQ3T906 1256 aa20.04■□□□□ 0.8
RETREG3-210ENST00000590541 IFIT1BQ5T764 474 aaKnown RBP20.04■□□□□ 0.8
RETREG3-210ENST00000590541 UTP14CQ5TAP6 766 aaKnown RBP20.04■□□□□ 0.8
RETREG3-210ENST00000590541 HOMER1Q86YM7 354 aa20.04■□□□□ 0.8
RETREG3-210ENST00000590541 SMRP1Q8NCR6 262 aa20.04■□□□□ 0.8
RETREG3-210ENST00000590541 P2RX5Q93086 422 aa20.04■□□□□ 0.8
RETREG3-210ENST00000590541 RTEL1Q9NZ71 1219 aa20.04■□□□□ 0.8
RETREG3-210ENST00000590541 NRCAMQ92823 1304 aa20.03■□□□□ 0.8
RETREG3-210ENST00000590541 CBX2Q14781 532 aaPredicted RBP20.03■□□□□ 0.8
RETREG3-210ENST00000590541 SEC23AQ15436 765 aa20.03■□□□□ 0.8
RETREG3-210ENST00000590541 PKN1Q16512 942 aa20.03■□□□□ 0.8
RETREG3-210ENST00000590541 SPPL3Q8TCT6 385 aa20.03■□□□□ 0.8
RETREG3-210ENST00000590541 LINC01599Q8WXQ3 324 aa20.03■□□□□ 0.8
RETREG3-210ENST00000590541 PIGSQ96S52 555 aa20.03■□□□□ 0.8
RETREG3-210ENST00000590541 PRRX2Q99811 253 aa20.03■□□□□ 0.8
RETREG3-210ENST00000590541 UBAC1Q9BSL1 405 aa20.03■□□□□ 0.8
RETREG3-210ENST00000590541 DIAPH3Q9NSV4 1193 aa20.03■□□□□ 0.8
RETREG3-210ENST00000590541 MRPL42Q9Y6G3 142 aaKnown RBP20.03■□□□□ 0.8
RETREG3-210ENST00000590541 TTC3P53804 2025 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 FIBPO43427 364 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 STAM2O75886 525 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 ITGB1P05556 798 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 COASYQ13057 564 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 FBXO47Q5MNV8 452 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 TAF2Q6P1X5 1199 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 SUGP1Q8IWZ8 645 aaKnown RBP20.02■□□□□ 0.8
RETREG3-210ENST00000590541 CRIPAKQ8N1N5 446 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 FBXL6Q8N531 539 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 EFHBQ8N7U6 833 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 KRT23Q9C075 422 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 RIOX1Q9H6W3 641 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 KMT2EQ8IZD2 1858 aa20.02■□□□□ 0.8
RETREG3-210ENST00000590541 GLP2RO95838 553 aa20.01■□□□□ 0.79
RETREG3-210ENST00000590541 SP4Q02446 784 aa20.01■□□□□ 0.79
RETREG3-210ENST00000590541 CWC27Q6UX04 472 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms