RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 TRIM43BA6NCK2 446 aa19.15■□□□□ 0.66
VAT1-204ENST00000587147 B4GALT4O60513 344 aa19.15■□□□□ 0.66
VAT1-204ENST00000587147 TIMP1P01033 207 aa19.15■□□□□ 0.66
VAT1-204ENST00000587147 ACTR2P61160 394 aa19.15■□□□□ 0.66
VAT1-204ENST00000587147 ORC2Q13416 577 aaPredicted RBP19.15■□□□□ 0.66
VAT1-204ENST00000587147 PIK3AP1Q6ZUJ8 805 aa19.15■□□□□ 0.66
VAT1-204ENST00000587147 SLC5A5Q92911 643 aa19.15■□□□□ 0.66
VAT1-204ENST00000587147 SNX21Q969T3 373 aa19.15■□□□□ 0.66
VAT1-204ENST00000587147 TRIM43Q96BQ3 446 aaPredicted RBP19.15■□□□□ 0.66
VAT1-204ENST00000587147 LBHD1Q9BQE6 289 aaPredicted RBP19.15■□□□□ 0.66
VAT1-204ENST00000587147 PRO3102Q9H379 93 aa19.15■□□□□ 0.66
VAT1-204ENST00000587147 ERAP1Q9NZ08 941 aa19.15■□□□□ 0.66
VAT1-204ENST00000587147 ZMYND8Q9ULU4 1186 aaPredicted RBP19.15■□□□□ 0.66
VAT1-204ENST00000587147 IGKV6D-21A0A0A0MT36 114 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 BTBD18B2RXH4 712 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 MSH4O15457 936 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 GNAT1P11488 350 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 NR5A1Q13285 461 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 PLPPR4Q7Z2D5 763 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 RDM1Q8NG50 284 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 AFAP1L1Q8TED9 768 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 FAM20AQ96MK3 541 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 AZI2Q9H6S1 392 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 PRDM5Q9NQX1 630 aaPredicted RBP19.14■□□□□ 0.65
VAT1-204ENST00000587147 PKD2L1Q9P0L9 805 aa19.14■□□□□ 0.65
VAT1-204ENST00000587147 DDX25Q9UHL0 483 aaKnown RBP19.14■□□□□ 0.65
VAT1-204ENST00000587147 PITPNM1O00562 1244 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 SORBS3O60504 671 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 RAG1P15918 1043 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 SYN1P17600 705 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 SFNP31947 248 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 RBL2Q08999 1139 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 LETM2Q2VYF4 491 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 FAM47CQ5HY64 1035 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 ABHD15Q6UXT9 468 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 CCDC155Q8N6L0 562 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 CAGE1Q8TC20 777 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 INTS4Q96HW7 963 aaKnown RBP19.13■□□□□ 0.65
VAT1-204ENST00000587147 SMC3Q9UQE7 1217 aa19.13■□□□□ 0.65
VAT1-204ENST00000587147 NRCAMQ92823 1304 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 TDP2O95551 362 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 MAGEA10P43363 369 aaPredicted RBP19.12■□□□□ 0.65
VAT1-204ENST00000587147 TRAPPC10P48553 1259 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 JAK3P52333 1124 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 SP4Q02446 784 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 LRCH2Q5VUJ6 765 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 FAM160B1Q5W0V3 765 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 MFSD5Q6N075 450 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 MIS18BP1Q6P0N0 1132 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 SH3RF1Q7Z6J0 888 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 ETNPPLQ8TBG4 499 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 TEKT3Q9BXF9 490 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 TRPV6Q9H1D0 765 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 KCNMB3Q9NPA1 279 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 TRMT13Q9NUP7 481 aaKnown RBP19.12■□□□□ 0.65
VAT1-204ENST00000587147 HDAC6Q9UBN7 1215 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 PCDHA10Q9Y5I2 948 aa19.12■□□□□ 0.65
VAT1-204ENST00000587147 WDR64B1ANS9 1081 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 CCNT1O60563 726 aaKnown RBP19.11■□□□□ 0.65
VAT1-204ENST00000587147 GAS7O60861 476 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 DTNBO60941 627 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 PSMD10O75832 226 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 CCNE2O96020 404 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 RPLP2P05387 115 aaKnown RBP19.11■□□□□ 0.65
VAT1-204ENST00000587147 U2AF2P26368 475 aaKnown RBP eCLIP19.11■□□□□ 0.65
VAT1-204ENST00000587147 GJB2P29033 226 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 PTK7Q13308 1070 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 BFSP2Q13515 415 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 PTGISQ16647 500 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 NOSTRINQ8IVI9 506 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 SLFN12Q8IYM2 578 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 GLG1Q92896 1179 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 NOC4LQ9BVI4 516 aaKnown RBP19.11■□□□□ 0.65
VAT1-204ENST00000587147 HIPK3Q9H422 1215 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 NOD1Q9Y239 953 aa19.11■□□□□ 0.65
VAT1-204ENST00000587147 C17orf102A2RUQ5 167 aa19.1■□□□□ 0.65
VAT1-204ENST00000587147 K7ELQ4 463 aaPredicted RBP19.1■□□□□ 0.65
VAT1-204ENST00000587147 CAND2O75155 1236 aa19.1■□□□□ 0.65
VAT1-204ENST00000587147 PARNO95453 639 aaKnown RBP19.1■□□□□ 0.65
VAT1-204ENST00000587147 PSAPP07602 524 aa19.1■□□□□ 0.65
VAT1-204ENST00000587147 SMIM10L2AP0DMW4 78 aa19.1■□□□□ 0.65
VAT1-204ENST00000587147 SMIM10L2BP0DMW5 78 aa19.1■□□□□ 0.65
VAT1-204ENST00000587147 PDCP20941 246 aa19.1■□□□□ 0.65
VAT1-204ENST00000587147 STAT5BP51692 787 aa19.1■□□□□ 0.65
VAT1-204ENST00000587147 EARS2Q5JPH6 523 aaKnown RBP19.1■□□□□ 0.65
VAT1-204ENST00000587147 UTP14CQ5TAP6 766 aaKnown RBP19.1■□□□□ 0.65
VAT1-204ENST00000587147 GDF6Q6KF10 455 aaPredicted RBP19.1■□□□□ 0.65
VAT1-204ENST00000587147 B3GNT9Q6UX72 402 aa19.1■□□□□ 0.65
VAT1-204ENST00000587147 TMEM199Q8N511 208 aa19.1■□□□□ 0.65
VAT1-204ENST00000587147 KAT6AQ92794 2004 aa19.09■□□□□ 0.65
VAT1-204ENST00000587147 RRN3P2A6NIE6 340 aa19.09■□□□□ 0.65
VAT1-204ENST00000587147 SLC37A4O43826 429 aa19.09■□□□□ 0.65
VAT1-204ENST00000587147 BAG4O95429 457 aaKnown RBP19.09■□□□□ 0.65
VAT1-204ENST00000587147 RFC2P35250 354 aa19.09■□□□□ 0.65
VAT1-204ENST00000587147 ADAM17P78536 824 aa19.09■□□□□ 0.65
VAT1-204ENST00000587147 FPGSQ05932 587 aa19.09■□□□□ 0.65
VAT1-204ENST00000587147 GNL2Q13823 731 aaKnown RBP19.09■□□□□ 0.65
VAT1-204ENST00000587147 CHRDL2Q6WN34 429 aa19.09■□□□□ 0.65
VAT1-204ENST00000587147 SERINC5Q86VE9 423 aa19.09■□□□□ 0.65
VAT1-204ENST00000587147 TRIM50Q86XT4 487 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms