RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ATP9AO75110 1047 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 ATG7O95352 703 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 RARBP10826 455 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 SMPD1P17405 629 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 GJA9P57773 515 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 SP2Q02086 613 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
CCDC47-203ENST00000580986 ARHGAP1Q07960 439 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 SPIRE1Q08AE8 756 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 TRIM32Q13049 653 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 PDIA5Q14554 519 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 NBR1Q14596 966 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 ZNF174Q15697 407 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 PRAMEF19Q5SWL8 479 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 LRCH2Q5VUJ6 765 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 IGSF22Q8N9C0 903 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 PPTC7Q8NI37 304 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 SH3TC2Q8TF17 1288 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 AK8Q96MA6 479 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 TEKT3Q9BXF9 490 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 RAB34Q9BZG1 259 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC47-203ENST00000580986 TMEM60Q9H2L4 133 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 JPH1Q9HDC5 661 aaPredicted RBP11.74□□□□□ -0.53
CCDC47-203ENST00000580986 SLC9A2Q9UBY0 812 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 TCEAL9Q9UHQ7 104 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 VAV3Q9UKW4 847 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 CLIC4Q9Y696 253 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
CCDC47-203ENST00000580986 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.73□□□□□ -0.53
CCDC47-203ENST00000580986 A6NJR5 290 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 ADCY6O43306 1168 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 SLC26A4O43511 780 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 ELP1O95163 1332 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 GGPS1O95749 300 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 ATP2B1P20020 1258 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 CCND3P30281 292 aaPredicted RBP11.73□□□□□ -0.53
CCDC47-203ENST00000580986 CPT1AP50416 773 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 JAK3P52333 1124 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 LY6KQ17RY6 165 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 TMEM266Q2M3C6 531 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 DTHD1Q6ZMT9 781 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 TLK2Q86UE8 772 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 DHX37Q8IY37 1157 aaKnown RBP11.73□□□□□ -0.53
CCDC47-203ENST00000580986 KCTD17Q8N5Z5 321 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 MCOLN1Q9GZU1 580 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 TTC12Q9H892 705 aaPredicted RBP11.73□□□□□ -0.53
CCDC47-203ENST00000580986 SPC25Q9HBM1 224 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
CCDC47-203ENST00000580986 BRCA2P51587 3418 aa11.73□□□□□ -0.53
CCDC47-203ENST00000580986 TCHHQ07283 1943 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 EMSYQ7Z589 1322 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 IGKV6D-21A0A0A0MT36 114 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 WDR64B1ANS9 1081 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 SPTLC2O15270 562 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 KPNA6O60684 536 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 ADAMTS4O75173 837 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 PPFIA4O75335 1185 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 GJB1P08034 283 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 CCL5P13501 91 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
CCDC47-203ENST00000580986 MUTP22033 750 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 LONP1P36776 959 aaKnown RBP11.72□□□□□ -0.53
CCDC47-203ENST00000580986 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 BRDTQ58F21 947 aaPredicted RBP11.72□□□□□ -0.53
CCDC47-203ENST00000580986 FOXD4L5Q5VV16 416 aaPredicted RBP11.72□□□□□ -0.53
CCDC47-203ENST00000580986 NEK9Q8TD19 979 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 FOXD4L4Q8WXT5 416 aaPredicted RBP11.72□□□□□ -0.53
CCDC47-203ENST00000580986 TNPO1Q92973 898 aaKnown RBP11.72□□□□□ -0.53
CCDC47-203ENST00000580986 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
CCDC47-203ENST00000580986 FTOQ9C0B1 505 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC47-203ENST00000580986 MLXIPQ9HAP2 919 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 DOCK5Q9H7D0 1870 aa11.72□□□□□ -0.53
CCDC47-203ENST00000580986 MARCH6O60337 910 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 CNGA1P29973 690 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 TXKP42681 527 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 SLC26A2P50443 739 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 ACTR2P61160 394 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 STK38Q15208 465 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 HSDL1Q3SXM5 330 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 CYFIP1Q7L576 1253 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.53
CCDC47-203ENST00000580986 TMEM87AQ8NBN3 555 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 KLHDC9Q8NEP7 349 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 OR6J1Q8NGC5 347 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 AFAP1L1Q8TED9 768 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 LEO1Q8WVC0 666 aaPredicted RBP11.71□□□□□ -0.53
CCDC47-203ENST00000580986 SEPT1Q8WYJ6 367 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 SPATA33Q96N06 139 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 GPR20Q99678 358 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 TSEN34Q9BSV6 310 aaKnown RBP11.71□□□□□ -0.53
CCDC47-203ENST00000580986 CRISPLD2Q9H0B8 497 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 AP5M1Q9H0R1 490 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 UNC93B1Q9H1C4 597 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 XPNPEP3Q9NQH7 507 aa11.71□□□□□ -0.53
CCDC47-203ENST00000580986 FBXO2Q9UK22 296 aaPredicted RBP11.71□□□□□ -0.53
CCDC47-203ENST00000580986 OGDHLQ9ULD0 1010 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms