RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 PDE6CP51160 858 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 LRRC63Q05C16 580 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 TEKT3Q9BXF9 490 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 C1orf112Q9NSG2 853 aa13.09□□□□□ -0.31
ERBB2-206ENST00000578373 RFX7Q2KHR2 1363 aa13.08□□□□□ -0.31
ERBB2-206ENST00000578373 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.32
ERBB2-206ENST00000578373 CLUL1Q15846 466 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 ANKRD20A3Q5VUR7 823 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 PICK1Q9NRD5 415 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 MYL1P05976 194 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 PLEKP08567 350 aaPredicted RBP13.08□□□□□ -0.32
ERBB2-206ENST00000578373 GUCY1A3Q02108 690 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 COASYQ13057 564 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 ARHGEF16Q5VV41 709 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 FYB2Q5VWT5 728 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 NSUN4Q96CB9 384 aaKnown RBP13.08□□□□□ -0.32
ERBB2-206ENST00000578373 FMO2Q99518 471 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 PHF20Q9BVI0 1012 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 PLCB1Q9NQ66 1216 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 MAP2P11137 1827 aaKnown RBP13.08□□□□□ -0.32
ERBB2-206ENST00000578373 BMP3P12645 472 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 PLA2G4AP47712 749 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 DYNLT1P63172 113 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 PPFIBP2Q8ND30 876 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 DEPTORQ8TB45 409 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 COG1Q8WTW3 980 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 CDHR2Q9BYE9 1310 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 CD209Q9NNX6 404 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 BARHL2Q9NY43 387 aa13.08□□□□□ -0.32
ERBB2-206ENST00000578373 PNMA6FA0A0J9YX94 578 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 WDR91A4D1P6 747 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 GH2P01242 217 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 CSF1RP07333 972 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 TRIM49P0CI25 452 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 TRIM49CP0CI26 452 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 NCAPHQ15003 741 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 PSMD6Q15008 389 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 CFAP157Q5JU67 520 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 PNKPQ96T60 521 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 BZW2Q9Y6E2 419 aaKnown RBP13.07□□□□□ -0.32
ERBB2-206ENST00000578373 CD163L1Q9NR16 1453 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 SMIM22K7EJ46 135 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 ZBED4O75132 1171 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 KLRK1P26718 216 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 NSFP46459 744 aaKnown RBP13.07□□□□□ -0.32
ERBB2-206ENST00000578373 SEPT2Q15019 361 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 SGO2Q562F6 1265 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 EMBQ6PCB8 327 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 METTL13Q8N6R0 699 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-206ENST00000578373 GOLGA8SH3BPF8 625 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 ATF2P15336 505 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 LMNB1P20700 586 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 GCLMP48507 274 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 HP1BP3Q5SSJ5 553 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-206ENST00000578373 ILDR1Q86SU0 546 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-206ENST00000578373 ADSSL1Q8N142 457 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 RILPQ96NA2 401 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 HEMGNQ9BXL5 484 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 PARVGQ9HBI0 331 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 PCDHA6Q9UN73 950 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 MRPL11Q9Y3B7 192 aaKnown RBP13.07□□□□□ -0.32
ERBB2-206ENST00000578373 PCDHA8Q9Y5H6 950 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 UTYO14607 1347 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 KRT14P02533 472 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 ACTN1P12814 892 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 AKR1B1P15121 316 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 EIF2AK2P19525 551 aaKnown RBP13.07□□□□□ -0.32
ERBB2-206ENST00000578373 CYP2C19P33261 490 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 PALM2Q8IXS6 379 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.07□□□□□ -0.32
ERBB2-206ENST00000578373 CCDC197Q8NCU1 140 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 CCDC17Q96LX7 622 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 ELAC2Q9BQ52 826 aaKnown RBP13.07□□□□□ -0.32
ERBB2-206ENST00000578373 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 DNAJC12Q9UKB3 198 aa13.07□□□□□ -0.32
ERBB2-206ENST00000578373 FOSP01100 380 aaPredicted RBP13.06□□□□□ -0.32
ERBB2-206ENST00000578373 PSMC4P43686 418 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 GLYCTKQ8IVS8 523 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 HAUS1Q96CS2 278 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 AMACRQ9UHK6 382 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 PASKQ96RG2 1323 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 EIF4E1BA6NMX2 242 aaKnown RBP13.06□□□□□ -0.32
ERBB2-206ENST00000578373 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
ERBB2-206ENST00000578373 GCFC2P16383 781 aaKnown RBP13.06□□□□□ -0.32
ERBB2-206ENST00000578373 MAPK4P31152 587 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 GRAPQ13588 217 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 RASGRP2Q7LDG7 609 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 TBC1D1Q86TI0 1168 aaPredicted RBP13.06□□□□□ -0.32
ERBB2-206ENST00000578373 CCDC110Q8TBZ0 833 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
ERBB2-206ENST00000578373 FEZ2Q9UHY8 353 aaPredicted RBP13.06□□□□□ -0.32
ERBB2-206ENST00000578373 MXI1P50539 228 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
ERBB2-206ENST00000578373 DR1Q01658 176 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 PPP2R5CQ13362 524 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 RBM43Q6ZSC3 357 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms