RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 ATL3Q6DD88 541 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 LINC00301Q8NCQ3 95 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 SH3TC2Q8TF17 1288 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
HERC1-214ENST00000561400 TGFB3P10600 412 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
HERC1-214ENST00000561400 KCNA2P16389 499 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 GUCY2CP25092 1073 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 KRT85P78386 507 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 ITGB3BPQ13352 177 aaPredicted RBP13.11□□□□□ -0.31
HERC1-214ENST00000561400 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 GJC2Q5T442 439 aaPredicted RBP13.11□□□□□ -0.31
HERC1-214ENST00000561400 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 ZNF577Q9BSK1 485 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 MED4Q9NPJ6 270 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
HERC1-214ENST00000561400 CFAP45Q9UL16 551 aa13.11□□□□□ -0.31
HERC1-214ENST00000561400 WDR81Q562E7 1941 aa13.1□□□□□ -0.31
HERC1-214ENST00000561400 TBX3O15119 743 aa13.1□□□□□ -0.31
HERC1-214ENST00000561400 DHX15O43143 795 aaKnown RBP13.1□□□□□ -0.31
HERC1-214ENST00000561400 INHAP05111 366 aa13.1□□□□□ -0.31
HERC1-214ENST00000561400 TXNP10599 105 aaKnown RBP13.1□□□□□ -0.31
HERC1-214ENST00000561400 CCND3P30281 292 aaPredicted RBP13.1□□□□□ -0.31
HERC1-214ENST00000561400 COPS5Q92905 334 aa13.1□□□□□ -0.31
HERC1-214ENST00000561400 SLC5A5Q92911 643 aa13.1□□□□□ -0.31
HERC1-214ENST00000561400 CDHR1Q96JP9 859 aa13.1□□□□□ -0.31
HERC1-214ENST00000561400 GDPD2Q9HCC8 539 aa13.1□□□□□ -0.31
HERC1-214ENST00000561400 YEATS4O95619 227 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 OR52Z1P0C646 297 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 UBA1P22314 1058 aaKnown RBP13.09□□□□□ -0.31
HERC1-214ENST00000561400 MARCKSP29966 332 aaPredicted RBP13.09□□□□□ -0.31
HERC1-214ENST00000561400 TXKP42681 527 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 IL17AQ16552 155 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 HS1BP3Q53T59 392 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 ZC3H12AQ5D1E8 599 aaKnown RBP13.09□□□□□ -0.31
HERC1-214ENST00000561400 MNS1Q8NEH6 495 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 FAM20AQ96MK3 541 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 SENP7Q9BQF6 1050 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 RCOR1Q9UKL0 485 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 CEP131Q9UPN4 1083 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 LAD1O00515 517 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 SORBS3O60504 671 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 PSMD10O75832 226 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 BAG4O95429 457 aaKnown RBP13.09□□□□□ -0.31
HERC1-214ENST00000561400 BMP15O95972 392 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 SMPD1P17405 629 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 STK38Q15208 465 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 IQSEC1Q6DN90 963 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 KCNV1Q6PIU1 500 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
HERC1-214ENST00000561400 LEO1Q8WVC0 666 aaPredicted RBP13.09□□□□□ -0.31
HERC1-214ENST00000561400 LENG1Q96BZ8 264 aaPredicted RBP13.09□□□□□ -0.31
HERC1-214ENST00000561400 TTC12Q9H892 705 aaPredicted RBP13.09□□□□□ -0.31
HERC1-214ENST00000561400 TELO2Q9Y4R8 837 aa13.09□□□□□ -0.31
HERC1-214ENST00000561400 MARCH6O60337 910 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 SLFN14P0C7P3 912 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 CNGA1P29973 690 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 TNFAIP2Q03169 654 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 GRIN1Q05586 938 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 SLC9C1Q4G0N8 1177 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 DUSP28Q4G0W2 176 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 LRCH2Q5VUJ6 765 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 CYFIP1Q7L576 1253 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 SLFN12Q8IYM2 578 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 PCDHA12Q9UN75 941 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.32
HERC1-214ENST00000561400 SPTLC2O15270 562 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 GGPS1O95749 300 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 PRPHP41219 470 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 SPIRE1Q08AE8 756 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 PKN2Q16513 984 aaKnown RBP13.08□□□□□ -0.32
HERC1-214ENST00000561400 ARL6IP4Q66PJ3 421 aaKnown RBP13.08□□□□□ -0.32
HERC1-214ENST00000561400 CLEC17AQ6ZS10 378 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 SPATA32Q96LK8 384 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 RIT2Q99578 217 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 TBC1D22BQ9NU19 505 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
HERC1-214ENST00000561400 VAV3Q9UKW4 847 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 FAM184BQ9ULE4 1060 aa13.08□□□□□ -0.32
HERC1-214ENST00000561400 GNEQ9Y223 722 aaKnown RBP13.08□□□□□ -0.32
HERC1-214ENST00000561400 NFASCO94856 1347 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 FRMPD3Q5JV73 1810 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 SEPT4O43236 478 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 GAS7O60861 476 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 FARP2O94887 1054 aaPredicted RBP13.07□□□□□ -0.32
HERC1-214ENST00000561400 AKR1A1P14550 325 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 TECP42680 631 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 NEDD9Q14511 834 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 B3GNT9Q6UX72 402 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 MYRIPQ8NFW9 859 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 FAM210AQ96ND0 272 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 SCAND2PQ9GZW5 306 aaPredicted RBP13.07□□□□□ -0.32
HERC1-214ENST00000561400 RSPH14Q9UHP6 348 aa13.07□□□□□ -0.32
HERC1-214ENST00000561400 MORC2Q9Y6X9 1032 aaPredicted RBP13.07□□□□□ -0.32
HERC1-214ENST00000561400 KLHL33A6NCF5 533 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms